Search results

Create the page "it:" on this wiki! See also the search results found.

• Bioscape
  Currently, this service is unavailable. It is anticipated that it will be deployed again in 2012.
  413 bytes (59 words) - 15:14, 24 November 2011
• Bioscape Installation
  ...on about installing the dependencies is not provided in this document, and it is recommended that you make use of your system's package management tools, ...on/env.sh</tt> in the <tt>bsadmin</tt> distribution and then incorporating it into your environment within a <tt>.bashrc</tt> or equivalent file as follo
  3 KB (393 words) - 13:36, 14 July 2010
• Displaying Bioscape Search Results
  ...ocument, potentially with information about the location of such mentions, it is much more convenient to produce a display which integrates such results
  1 KB (182 words) - 13:48, 14 July 2010
• iRefScape debugging
  ...r the first time installation of the plugin, if the user tries to activate it there will be an error message. The user will be instructed to restart Cyto Reasons for this: The plugin requires the installation location of it self, before downloading the data component. PluginManager.getPluginURLs()
  1 KB (160 words) - 09:14, 18 June 2010
• Bioscape Configuration
  It may be necessary to initialise a "database cluster" for Bioscape. This is t ...rectory given in the above commands will save you the effort of specifying it later with other
  5 KB (714 words) - 13:38, 14 July 2010
• iRefIndex Data Preparation for iRefScape
  <li>Compile the source code. It might be necessary to edit the <tt>build.xml</tt> file, changing the partic It may then be run as follows:
  5 KB (822 words) - 18:37, 17 November 2011
• Bioscape Tokenisation
  However, it should be possible to mitigate these problems by adopting a number of techn ...n forms, For example, "AN" could be a valid component of a gene name; thus it is not desirable to filter out this form of the stop word "an", since such
  6 KB (954 words) - 13:45, 14 July 2010
• Canonicalization
  ==What is canonicalization and how does it alter iRefIndex and iRefWeb data? == ...7-1) but it is not always the -1 variant of the canonical accession (i.e., it could be O43497-4). The protein isoform that is chosen to be the canonical
  6 KB (981 words) - 16:44, 14 March 2013
• Gene Ontology similarity measurement
  # Each concept has a probability associated with it (defining the probability of "encountering an instance" of that concept). ...umes all possible concepts, the probability of encountering an instance of it is 1.
  6 KB (928 words) - 18:01, 29 February 2012
• Perl example code
  print "add 3 to $z: $z + 3\n"; #did it work? #for each letter in the sequence check if it is the base G
  12 KB (1,936 words) - 15:22, 22 November 2011
• Bioscape Result Assessment
  With this information available to Bioscape, it becomes possible to see each result set in the same document and to perform Using BioCreative results, it is possible to take a selection of Bioscape results and to assess them acco
  10 KB (1,540 words) - 16:48, 15 July 2010
• iRefIndex MITAB2.5 Parser
  It will be necessary to change the date details included in the above filename ...nerally split to expose the prefix and identifier, name or value following it.
  5 KB (720 words) - 14:51, 19 September 2011
• Magrathea
  .... Once the ligand is outside the compartment, its state (yellow) prevents it from assembling with the importing receptor (black) for a second time. ...er to life, the universe, and everything. Amongst the people who worked on it was Slartibartfast, a coastal designer who won an award for his work on Nor
  5 KB (770 words) - 15:09, 24 November 2011
• Bioscape Indexing
  ...r types, it is highly likely to "bloat" the term dictionary and bring with it undesirable resource and performance characteristics. ...consider allocating ranges of usable identifiers within the system. Thus, it becomes possible to process a number of sections of a literature collection
  6 KB (874 words) - 13:45, 14 July 2010
• iRefR
  iRefR is an R package that provides access to [[iRefIndex]]. It allows the user to load any version of the consolidated protein interaction
  1 KB (198 words) - 16:08, 2 December 2011
• Introductory Perl
  Notepad is found in the same menu, but it can be easier to open Notepad by typing the <tt>notepad</tt> command in the ...makes sure that the new file is created in the right place. In this case, it is called <tt>example1.plx</tt>. If you started Notepad from the menu, when
  4 KB (596 words) - 11:20, 9 May 2012
• iRefIndex Maintenance
  When dealing with multiple instances of MySQL it can be useful to remember the <tt>--defaults-file</tt> option to the MySQL ...and delimited/tabular dumps. Although the latter is arguably more elegant, it does not offer much help with the task of restoring the tables in the corre
  7 KB (1,088 words) - 16:05, 26 October 2012
• iRefScape 0.8 Installation
  ...plugin called iRefIndex installed, it is recommended that you first delete it''', selecting the "Manage Plugins" option in the "Plugins" menu. This will # When the plugin is started for the first time, it will download the publicly available dataset.
  15 KB (2,297 words) - 16:09, 6 July 2011
• iRefScape 1.0 Installation
  ...plugin called iRefIndex installed, it is recommended that you first delete it''', selecting the "Manage Plugins" option in the "Plugins" menu. This will # When the plugin is started for the first time, it will download the dataset.
  18 KB (2,800 words) - 20:08, 14 March 2013
• iRefIndex Data Preparation for iRefWeb
  ...ogram needs Python 2.5 or later since it uses the <tt>hashlib</tt> module. It could probably be made compatible with earlier Python versions if necessary
  6 KB (1,046 words) - 13:04, 20 October 2011

View (previous 20 | next 20) (20 | 50 | 100 | 250 | 500)