Difference between revisions of "Antonio Mora"
| Line 13: | Line 13: | ||
I have been working in a method to represent both molecules and the context in which cellular reactions occur, using [http://en.wikipedia.org/wiki/Autonomous_agent autonomous agents], and creating a software for visualization and spatio-temporal [http://en.wikipedia.org/wiki/Computer_simulation simulation] of [http://en.wikipedia.org/wiki/Cell_signaling signaling pathways] based on such a concept. | I have been working in a method to represent both molecules and the context in which cellular reactions occur, using [http://en.wikipedia.org/wiki/Autonomous_agent autonomous agents], and creating a software for visualization and spatio-temporal [http://en.wikipedia.org/wiki/Computer_simulation simulation] of [http://en.wikipedia.org/wiki/Cell_signaling signaling pathways] based on such a concept. | ||
| + | |||
| + | ====See also==== | ||
| + | * [http://magrathea.uio.no/ Project ''Magrathea''] | ||
| + | * Poster ISMB2007 and BwB2007 | ||
===Protein Interaction Network Analysis=== | ===Protein Interaction Network Analysis=== | ||
| Line 18: | Line 22: | ||
Currently, I am doing statistical analysis of the human [http://en.wikipedia.org/wiki/Protein-protein_interaction protein interaction] network generated from the [http://donaldson.uio.no/wiki/iRefIndex iRefIndex] [http://en.wikipedia.org/wiki/Biological_database interaction database]. I have compared both CORUM and iRefIndex protein complex databases to groups of proteins that are assumed to be involved in the same disease ([http://donaldson.uio.no/wiki/DiG:_Disease_groups DiG]), in order to computationally determine all known diseases that might be related to known [http://en.wikipedia.org/wiki/Protein_complex protein complexes] in humans. | Currently, I am doing statistical analysis of the human [http://en.wikipedia.org/wiki/Protein-protein_interaction protein interaction] network generated from the [http://donaldson.uio.no/wiki/iRefIndex iRefIndex] [http://en.wikipedia.org/wiki/Biological_database interaction database]. I have compared both CORUM and iRefIndex protein complex databases to groups of proteins that are assumed to be involved in the same disease ([http://donaldson.uio.no/wiki/DiG:_Disease_groups DiG]), in order to computationally determine all known diseases that might be related to known [http://en.wikipedia.org/wiki/Protein_complex protein complexes] in humans. | ||
| − | === | + | ====See also==== |
| − | + | * Poster ISMB2009 | |
| − | * | ||
* [http://bioinformatics.wikidot.com/graph-theory-and-biology Material developed by students of the course MBV-INF 4410 under my supervision] | * [http://bioinformatics.wikidot.com/graph-theory-and-biology Material developed by students of the course MBV-INF 4410 under my supervision] | ||
* The "PIN-Analysis-using-Bioconductor" Labs | * The "PIN-Analysis-using-Bioconductor" Labs | ||
Revision as of 10:13, 26 June 2009
Pizza at the airport
Dinner at the Biotech Retreat
What am I doing?
I am a PhD student at IMBV (University of Oslo) and I belong to Donaldson's group (Biotechnology Centre of Oslo) since October, 2006. Currently, I am working in two different areas: Agent-based modeling of cellular pathways and Protein Interaction Network Analysis. I am also part of the courses MBV-3070, MBV-3020, MBV-4010 and MBV-INF 4410, as a teaching assistant.
Agent-based modeling of cellular pathways
I have been working in a method to represent both molecules and the context in which cellular reactions occur, using autonomous agents, and creating a software for visualization and spatio-temporal simulation of signaling pathways based on such a concept.
See also
- Project Magrathea
- Poster ISMB2007 and BwB2007
Protein Interaction Network Analysis
Currently, I am doing statistical analysis of the human protein interaction network generated from the iRefIndex interaction database. I have compared both CORUM and iRefIndex protein complex databases to groups of proteins that are assumed to be involved in the same disease (DiG), in order to computationally determine all known diseases that might be related to known protein complexes in humans.
See also
- Poster ISMB2009
- Material developed by students of the course MBV-INF 4410 under my supervision
- The "PIN-Analysis-using-Bioconductor" Labs
Where can you find me?
P.S. Who am I...?
I am a human being.
Education: Master in Bioinformatics (2004); Master in Chemical Engineering (1998); B.Sc. Chemical Engineering (1995)
Religion: From an ontological point of view: Atheist; from a pragmatic point of view: Religious tolerance; from an ethical point of view: Humanism && Buddhism; from a satirical point of view: Church of the Subgenius
Politics: From an idealistic point of view: Anarchist; from a pragmatic point of view: Leftist; from an activist point of view: Human Rights && Media Watch
Arts and Entertainment: Literature and Theater: Writer / Practicioner (when I have time)
Food: Non spicy. And I am not a vegetarian
