Difference between revisions of "Mapping of terms to MI term ids - iRefIndex 6.0"
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| three-dimensional-structure||MI:0114||x-ray crystallography||though other methods might be used to define three dimensional structure, this seems to be the closest match | | three-dimensional-structure||MI:0114||x-ray crystallography||though other methods might be used to define three dimensional structure, this seems to be the closest match | ||
|- | |- | ||
− | | Dosage Growth Defect||MI:0254||genetic interference|| | + | | Dosage Growth Defect||MI:0254||genetic interference||biogrids mapping |
|- | |- | ||
− | | Dosage Lethality||MI:0254||genetic interference|| | + | | Dosage Lethality||MI:0254||genetic interference||biogrids mapping |
|- | |- | ||
− | | Dosage Rescue||MI:0254||genetic interference|| | + | | Dosage Rescue||MI:0254||genetic interference||biogrids mapping |
|- | |- | ||
− | | Phenotypic Enhancement||MI:0254||genetic interference|| | + | | Phenotypic Enhancement||MI:0254||genetic interference||biogrids mapping |
|- | |- | ||
− | | Phenotypic Suppression||MI:0254||genetic interference|| | + | | Phenotypic Suppression||MI:0254||genetic interference||biogrids mapping |
|- | |- | ||
− | | Synthetic Growth Defect||MI:0254||genetic interference|| | + | | Synthetic Growth Defect||MI:0254||genetic interference||biogrids mapping |
|- | |- | ||
− | | Synthetic Lethality||MI:0254||genetic interference|| | + | | Synthetic Lethality||MI:0254||genetic interference||biogrids mapping |
|- | |- | ||
− | | Synthetic Rescue||MI:0254||genetic interference|| | + | | Synthetic Rescue||MI:0254||genetic interference||biogrids mapping |
|- | |- | ||
| modeled by author||MI:0363||inferred by author||alternate label for this term was listed with no MI term id | | modeled by author||MI:0363||inferred by author||alternate label for this term was listed with no MI term id | ||
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| trihybrid||MI:0437||protein tri hybrid||alternate label for this term was listed with no MI term id | | trihybrid||MI:0437||protein tri hybrid||alternate label for this term was listed with no MI term id | ||
|- | |- | ||
− | | Synthetic Haploinsufficiency||MI:0254||genetic interference|| | + | | Synthetic Haploinsufficiency||MI:0254||genetic interference||biogrids mapping |
|- | |- | ||
| homogeneous time-resolved fluo||MI:0510||homogeneous time resolved fluorescence||variation on preferred term was listed with no MI term id | | homogeneous time-resolved fluo||MI:0510||homogeneous time resolved fluorescence||variation on preferred term was listed with no MI term id | ||
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| Invivo||MI:0686||unspecified method||this is an obsolete term that is undefined so it is being mapped to \"unspecified method\" | | Invivo||MI:0686||unspecified method||this is an obsolete term that is undefined so it is being mapped to \"unspecified method\" | ||
|- | |- | ||
− | | Protein-RNA||MI:0686||unspecified method|| | + | | Protein-RNA||MI:0686||unspecified method||biogrids mapping |
|- | |- | ||
| transient-coexpression||MI:0686||unspecified method||cant find a resonable match to this term | | transient-coexpression||MI:0686||unspecified method||cant find a resonable match to this term | ||
Line 284: | Line 284: | ||
| NA||MI:0686||unspecified method||cant find a resonable match to this term | | NA||MI:0686||unspecified method||cant find a resonable match to this term | ||
|- | |- | ||
− | | Protein-peptide||MI:0686||unspecified method|| | + | | Protein-peptide||MI:0686||unspecified method||biogrids mapping |
|- | |- | ||
| monoclonal-antibody-blockade||MI:0686||unspecified method||cant find a resonable match to this term | | monoclonal-antibody-blockade||MI:0686||unspecified method||cant find a resonable match to this term | ||
Line 426: | Line 426: | ||
| ubiquitin reconstruction||MI:0112||ubiquitin reconstruction||no cv term id given - auto-mapping ok | | ubiquitin reconstruction||MI:0112||ubiquitin reconstruction||no cv term id given - auto-mapping ok | ||
|- | |- | ||
− | | Co-crystal Structure||MI:0114||x-ray||no cv term id given - manual-mapping ok - using | + | | Co-crystal Structure||MI:0114||x-ray||no cv term id given - manual-mapping ok - using biogrids mapping |
|- | |- | ||
| x-ray crystallography||MI:0114||x-ray crystallography||no cv term id given - auto-mapping ok | | x-ray crystallography||MI:0114||x-ray crystallography||no cv term id given - auto-mapping ok | ||
Line 468: | Line 468: | ||
| electrophoretic mobility shift assay||MI:0413||electrophoretic mobility shift assay||no cv term id given - auto-mapping ok | | electrophoretic mobility shift assay||MI:0413||electrophoretic mobility shift assay||no cv term id given - auto-mapping ok | ||
|- | |- | ||
− | | Biochemical Activity||MI:0415||enzymatic studies||no cv term id given - manual-mapping ok - using | + | | Biochemical Activity||MI:0415||enzymatic studies||no cv term id given - manual-mapping ok - using biogrids mapping |
|- | |- | ||
| fluorescence microscopy||MI:0416||fluorescence microscopy||no cv term id given - auto-mapping ok | | fluorescence microscopy||MI:0416||fluorescence microscopy||no cv term id given - auto-mapping ok | ||
Line 480: | Line 480: | ||
| kinase scintillation proximity assay||MI:0425||kinase scintillation proximity assay||no cv term id given - auto-mapping ok | | kinase scintillation proximity assay||MI:0425||kinase scintillation proximity assay||no cv term id given - auto-mapping ok | ||
|- | |- | ||
− | | Co-localization||MI:0428||imaging techniques||no cv term id given - manual-mapping ok - using | + | | Co-localization||MI:0428||imaging techniques||no cv term id given - manual-mapping ok - using biogrids mapping |
|- | |- | ||
| coloc by immunost||MI:0428||imaging techniques||no cv term id given - manual-mapping ok | | coloc by immunost||MI:0428||imaging techniques||no cv term id given - manual-mapping ok | ||
Line 552: | Line 552: | ||
| | | | ||
|} | |} | ||
− | |||
== All iRefIndex Pages == | == All iRefIndex Pages == |
Revision as of 15:56, 1 March 2010
In those cases where an interaction data record lists a term where a controlled vocabulary term is expected, and no controlled vocabulary term identifier is found, the term found in the record will be mapped by a curator to the closest possible term identifier using the molecular interaction ontology.
These corrections are made in two cases.
1) For interaction types where no cv term id is listed.
2) For interaction detection types where no cv term id is listed.
The mappings used are shown below. Feedback (and corrections) by databases is welcome. ian.donaldson@biotek.uio.no
These mappings are reviewed from one release to another.
Additional details are available at http://www.ebi.ac.uk/ontology-lookup/
These corrections are included in the iRefIndex MITAB files and they are used by the iRefWeb interface.
Interaction Type Terms
term found in record | curator-assigned term id | assigned term | notes |
Co-fractionation | MI:0403 | colocalization | Interaction detection method name used inappropriately as a interaction type name |
Affinity Capture-Western | MI:0914 | association | Interaction detection method name used inappropriately as a interaction type name |
Dosage Rescue | MI:0796 | suppressive genetic interaction defined by inequality | Interaction detection method name used inappropriately as a interaction type name - assuming that the rescuing background had WT phenotype |
Synthetic Rescue | MI:0796 | suppressive genetic interaction defined by inequality | Interaction detection method name used inappropriately as a interaction type name - assuming that the rescuing background had WT phenotype |
Synthetic Lethality | MI:0794 | synthetic genetic interaction defined by inequality | Interaction detection method name used inappropriately as a interaction type name - assuming that the a and b background had WT phenotype |
Synthetic Growth Defect | MI:0794 | synthetic genetic interaction defined by inequality | Interaction detection method name used inappropriately as a interaction type name - assuming that the a and b background had WT phenotype |
Dosage Lethality | MI:0794 | synthetic genetic interaction defined by inequality | Interaction detection method name used inappropriately as a interaction type name - assuming that the a and b background had WT phenotype |
Phenotypic Enhancement | MI:0799 | synthetic genetic interaction defined by inequality | Interaction detection method name used inappropriately as a interaction type name - assuming that enhancing b background had WT phenotype |
Phenotypic Suppression | MI:0796 | suppressive genetic interaction defined by inequality | Interaction detection method name used inappropriately as a interaction type name - here it is difficult to say what the inequality between a, b, ab and WT is. |
Dosage Growth Defect | MI:0931 | genetic interaction defined by inequality | Interaction detection method name used inappropriately as a interaction type name - here i am assuming that the rescuing b background had WT phenotype |
Affinity Capture-MS | MI:0914 | association | Interaction detection method name used inappropriately as a interaction type name |
Co-crystal Structure | MI:0915 | physical association | Interaction detection method name used inappropriately as a interaction type name |
Co-purification | MI:0914 | association | Interaction detection method name used inappropriately as a interaction type name |
Affinity Capture-Luminescence | MI:0914 | association | Interaction detection method name used inappropriately as a interaction type name |
Affinity Capture-RNA | MI:0914 | association | Interaction detection method name used inappropriately as a interaction type name |
Synthetic Haploinsufficiency | MI:0208 | genetic interaction | Interaction detection method name used inappropriately as a interaction type name |
DNA replication elongation | MI:0190 | interaction type? | Impossible to map. These examples should be looked at. Map to root term for interaction type. |
FRET | MI:0914 | association | Interaction detection method name used inappropriately as a interaction type name |
PCA | MI:0915 | physical association | 99% of the time when 2 hybrid is the method, the database will list the interaction as MI:0915 (physical interaction) |
Two-hybrid | MI:0915 | physical association | 99% of the time when 2 hybrid is the method, the database will list the interaction as MI:0915 (physical interaction) |
Co-localization | MI:0403 | colocalization | Interaction detection method name used inappropriately as a interaction type name |
Reconstituted Complex | MI:0915 | physical association | |
Biochemical Activity | MI:0915 | physical association? | Individual examples should be reviewed |
Protein-peptide | MI:0407 | direct interaction | |
Protein-RNA | MI:0915 | physical association | |
Biochemical reaction | MI:0915 | physical association? | Individual examples should be reviewed |
covalent interaction | MI:0195 | direct interaction | |
Far Western | MI:0407 | direct interaction | Depends how the experiment was done. Individual cases should be examined. Interaction detection method name used inappropriately as a interaction type name |
phosphorylation reaction | MI:0217 | phosphorylation reaction | Correct term. MI term id was simply missing |
dna strand elongation | MI:0701 | dna strand elongation | Correct term. MI term id was simply missing |
methylation reaction | MI:0213 | methylation reaction | Correct term. MI term id was simply missing |
dephosphorylation reaction | MI:0203 | dephosphorylation reaction | Correct term. MI term id was simply missing |
demethylation reaction | MI:0871 | demethylation reaction | Correct term. MI term id was simply missing |
acetylation reaction | MI:0192 | acetylation reaction | Correct term. MI term id was simply missing |
ubiquitination reaction | MI:0220 | ubiquitination reaction | Correct term. MI term id was simply missing |
cleavage reaction | MI:0194 | cleavage reaction | Correct term. MI term id was simply missing |
deacetylation reaction | MI:0197 | deacetylation reaction | Correct term. MI term id was simply missing |
adp ribosylation reaction | MI:0557 | adp ribosylation reaction | Correct term. MI term id was simply missing |
sumoylation reaction | MI:0566 | sumoylation reaction | Correct term. MI term id was simply missing |
phosphotransfer reaction | MI:0844 | phosphotransfer reaction | Correct term. MI term id was simply missing |
neddylation reaction | MI:0567 | neddylation reaction | Correct term. MI term id was simply missing |
palmitoylation reaction | MI:0216 | palmitoylation reaction | Correct term. MI term id was simply missing |
deneddylation reaction | MI:0569 | deneddylation reaction | Correct term. MI term id was simply missing |
deubiquitination reaction | MI:0204 | deubiquitination reaction | Correct term. MI term id was simply missing |
glycosylation reaction | MI:0559 | glycosylation reaction | Correct term. MI term id was simply missing |
hydroxylation reaction | MI:0210 | hydroxylation reaction | Correct term. MI term id was simply missing |
amidation reaction | MI:0193 | amidation reaction | Correct term. MI term id was simply missing |
Interaction Detection Method Terms
term found in record | curator-assigned term id | assigned term | notes |
interaction detection method | MI:0001 | interaction detection method | correct term, MI term id was missing |
Affinity Capture-Luminescence | MI:0004 | affinity chromatography technology | biogrids mapping |
Affinity Capture-MS | MI:0004 | affinity chromatography technology | biogrids mapping |
Affinity Capture-RNA | MI:0004 | affinity chromatography technology | biogrids mapping |
Affinity Capture-Western | MI:0004 | affinity chromatography technology | biogrids mapping |
Affinity purification | MI:0004 | affinity chromatography technology | alternate label for this term was listed with no MI term id |
LRET | MI:0012 | bioluminescence resonance energy transfer | alternate label for this term was listed with no MI term id |
bacterial two-hybrid | MI:0014 | adenylate cyclase complementation | alternate label for this term was listed with no MI term id |
two-hybrid-test | MI:0018 | two hybrid | variation on preferred term was listed with no MI term id |
Gal4 transcription regeneration | MI:0018 | two hybrid | alternate label for this term was listed with no MI term id |
immunoprecipitation | MI:0019 | coimmunoprecipitation | alternate label for this term was listed with no MI term id |
Co-IP | MI:0019 | coimmunoprecipitation | alternate label for this term was listed with no MI term id |
cosedimentation through density gradients | MI:0029 | cosedimentation through density gradient | correct term, MI term id was missing |
cross-linking studies | MI:0030 | cross-linking study | variation on preferred term was listed with no MI term id |
cross-linking | MI:0030 | cross-linking study | variation on preferred term was listed with no MI term id |
Label transfer techniques | MI:0031 | protein cross-linking with a bifunctional reagent | alternate label for this term was listed with no MI term id |
Photoaffinity labelling | MI:0031 | protein cross-linking with a bifunctional reagent | alternate label for this term was listed with no MI term id |
Electron cryomicroscopy | MI:0040 | electron microscopy | alternate label for this term was listed with no MI term id |
Electron crystallography | MI:0040 | electron microscopy | alternate label for this term was listed with no MI term id |
GTPase | MI:0419 | gtpase assay | variation on preferred term was listed with no MI term id |
Affinity blotting | MI:0047 | far western blotting | alternate label for this term was listed with no MI term id |
Far Western | MI:0047 | far western blotting | variation on preferred term was listed with no MI term id |
far-western | MI:0047 | far western blotting | variation on preferred term was listed with no MI term id |
Filter overlay assay | MI:0049 | filter binding | alternate label for this term was listed with no MI term id |
fluorescence technologies | MI:0051 | fluorescence technology | variation on preferred term was listed with no MI term id |
fluorescence-anisotropy | MI:0053 | fluorescence polarization spectroscopy | variation on preferred term was listed with no MI term id |
FRET analysis | MI:0055 | fluorescent resonance energy transfer | alternate label for this term was listed with no MI term id |
resonance-energy-transfer | MI:0055 | fluorescent resonance energy transfer | variation on preferred term was listed with no MI term id |
RET | MI:0055 | fluorescent resonance energy transfer | alternate label for this term was listed with no MI term id |
in silico methods | MI:0063 | interaction prediction | alternate label for this term was listed with no MI term id |
mass-spectrometry | MI:0069 | mass spectrometry studies of complexes | listed term was a partial match to this term, no MI term id was given - individual cases should be reviewed |
Size Exclusion Chromatography | MI:0071 | molecular sieving | alternate label for this term was listed with no MI term id |
Siezing column | MI:0071 | molecular sieving | alternate label for this term was listed with no MI term id |
PCA | MI:0090 | protein complementation assay | alternate label for this term was listed with no MI term id |
chromatography technologies | MI:0091 | chromatography technology | variation on preferred term was listed with no MI term id |
column chromatography | MI:0091 | chromatography technology | alternate label for this term was listed with no MI term id |
Reconstituted Complex | MI:0096 | pull down | biogrids mapping |
RIA Radio Immuno Assay | MI:0099 | scintillation proximity assay | alternate label for this term was listed with no MI term id |
BIAcore[r] | MI:0107 | surface plasmon resonance | alternate label for this term was listed with no MI term id |
Optical biosensor | MI:0107 | surface plasmon resonance | alternate label for this term was listed with no MI term id |
immunoblotting | MI:0113 | western blot | immunoblotting might be used as a method of interaction detection though it is usually a method for participant identification - cases should be reviewed individually |
three-dimensional-structure | MI:0114 | x-ray crystallography | though other methods might be used to define three dimensional structure, this seems to be the closest match |
Dosage Growth Defect | MI:0254 | genetic interference | biogrids mapping |
Dosage Lethality | MI:0254 | genetic interference | biogrids mapping |
Dosage Rescue | MI:0254 | genetic interference | biogrids mapping |
Phenotypic Enhancement | MI:0254 | genetic interference | biogrids mapping |
Phenotypic Suppression | MI:0254 | genetic interference | biogrids mapping |
Synthetic Growth Defect | MI:0254 | genetic interference | biogrids mapping |
Synthetic Lethality | MI:0254 | genetic interference | biogrids mapping |
Synthetic Rescue | MI:0254 | genetic interference | biogrids mapping |
modeled by author | MI:0363 | inferred by author | alternate label for this term was listed with no MI term id |
modelled by author | MI:0363 | inferred by author | alternate label for this term was listed with no MI term id |
modeled by curator | MI:0364 | inferred by curator | alternate label for this term was listed with no MI term id |
modelled by curator | MI:0364 | inferred by curator | alternate label for this term was listed with no MI term id |
affinity technologies | MI:0400 | affinity technology | variation on preferred term was listed with no MI term id |
Co-fractionation | MI:0401 | biochemical | biogrids mapping |
Co-purification | MI:0401 | biochemical | biogrids mapping |
colocalization by immunostaining | MI:0022 | colocalization by immunostaining | correct term, MI term id was missing |
elisa: enzyme-linked immunosorbent assay | MI:0411 | enzyme linked immunosorbent assay | variation on preferred term was listed with no MI term id |
Gel retardation assay | MI:0413 | electrophoretic mobility shift assay | alternate label for this term was listed with no MI term id |
band shift | MI:0413 | electrophoretic mobility shift assay | alternate label for this term was listed with no MI term id |
gel-retardation-assays | MI:0413 | electrophoretic mobility shift assay | variation on preferred term was listed with no MI term id |
microscopy | MI:0428 | imaging technique | alternate label for this term was listed with no MI term id |
colocalization by fluorescent probes cloning | MI:0021 | colocalization by fluorescent probes cloning | correct term, MI term id was missing |
yeast one-hybrid | MI:0432 | one hybrid | alternate label for this term was listed with no MI term id |
bridge assay | MI:0437 | protein tri hybrid | alternate label for this term was listed with no MI term id |
trihybrid | MI:0437 | protein tri hybrid | alternate label for this term was listed with no MI term id |
Synthetic Haploinsufficiency | MI:0254 | genetic interference | biogrids mapping |
homogeneous time-resolved fluo | MI:0510 | homogeneous time resolved fluorescence | variation on preferred term was listed with no MI term id |
in vitro evolution of nucleic acids | MI:0657 | systematic evolution of ligands by exponential enrichment | alternate label for this term was listed with no MI term id |
tap tag coimmunoprecipitation | MI:0676 | tandem affinity purification | variation on preferred term was listed with no MI term id |
antigen capture assay | MI:0678 | antibody array | alternate label for this term was listed with no MI term id |
interaction-adhesion-assay | MI:0686 | unspecified method | cant find a resonable match to this term |
Invivo | MI:0686 | unspecified method | this is an obsolete term that is undefined so it is being mapped to \"unspecified method\" |
Protein-RNA | MI:0686 | unspecified method | biogrids mapping |
transient-coexpression | MI:0686 | unspecified method | cant find a resonable match to this term |
in vivo | MI:0686 | unspecified method | this is an obsolete term that is undefined so it is being mapped to \"unspecified method\" |
NA | MI:0686 | unspecified method | cant find a resonable match to this term |
Protein-peptide | MI:0686 | unspecified method | biogrids mapping |
monoclonal-antibody-blockade | MI:0686 | unspecified method | cant find a resonable match to this term |
in vitro | MI:0686 | unspecified method | this is an obsolete term that is undefined so it is being mapped to \"unspecified method\" |
IEC | MI:0686 | unspecified method | cant find a resonable match to this term |
KISS | MI:0728 | gal4 vp16 complementation | alternate label for this term was listed with no MI term id |
mammalian two hybrid | MI:0728 | gal4 vp16 complementation | alternate label for this term was listed with no MI term id |
karyoplasmic interaction ion strategy | MI:0728 | gal4 vp16 complementation | alternate label for this term was listed with no MI term id |
autoradiography | MI:0833 | autoradiography | this term does have a MI term id although it is difficuly to see that it would be a legitamate interaction detection method - cases should be reviewed individually |
surface-plasmon-resonance-chip | MI:0921 | surface plasmon resonance array | variation on a preferred term was listed with no MI term id (chip = array?) |
deuterium-hydrogen-exchange | MI:0944 | mass spectrometry study of hydrogen/deuterium exchange | mass spectrometry study of hydrogen/deuterium exchange |
affinity chromatography technologies | MI:0004 | affinity chromatography technology | variation on preferred term was listed with no MI term id |
affinity chromatography technology | MI:0004 | affinity chromatography technology | correct term, MI term id was missing |
affinity-chromatography | MI:0004 | affinity chromatography technology | variation on preferred term was listed with no MI term id |
anti bait coimmunoprecipitation | MI:0006 | anti bait coimmunoprecipitation | no cv term id given - auto-mapping ok |
anti tag coimmunoprecipitation | MI:0007 | anti tag coimmunoprecipitation | no cv term id given - auto-mapping ok |
beta galactosidase complementation | MI:0010 | beta galactosidase complementation | no cv term id given - auto-mapping ok |
beta lactamase complementation | MI:0011 | beta lactamase complementation | no cv term id given - auto-mapping ok |
bioluminescence resonance energy transfer | MI:0012 | bioluminescence resonance energy transfer | no cv term id given - auto-mapping ok |
adenylate cyclase complementation | MI:0014 | adenylate cyclase complementation | no cv term id given - auto-mapping ok |
circular dichroism | MI:0016 | circular dichroism | no cv term id given - auto-mapping ok |
classical fluorescence spectroscopy | MI:0017 | classical fluorescence spectroscopy | no cv term id given - auto-mapping ok |
2-hybrid | MI:0018 | two hybrid | no cv term id given - auto-mapping ok |
classical two hybrid | MI:0018 | two hybrid | no cv term id given - auto-mapping ok |
Two-hybrid | MI:0018 | two hybrid | no cv term id given - mapping ok - used biogrids mapping |
yeast two hybrid | MI:0018 | two hybrid | no cv term id given - auto-mapping ok |
co-immunoprecipitation | MI:0019 | coimmunoprecipitation | no cv term id given - auto-mapping ok |
coimmunoprecipitation | MI:0019 | coimmunoprecipitation | no cv term id given - auto-mapping ok |
coip: coimmunoprecipitation | MI:0019 | coimmunoprecipitation | no cv term id given - auto-mapping ok |
transmission electron microscopy | MI:0020 | transmission electron microscopy | no cv term id given - auto-mapping ok |
cosedimentation in solution | MI:0028 | cosedimentation in solution | no cv term id given - auto-mapping ok |
cosedimentation through density gradient | MI:0029 | cosedimentation through density gradient | no cv term id given - auto-mapping ok |
sucrose-gradient-sedimentation | MI:0029 | density sedimentatio | no cv term id given - auto-mapping ok |
cross-linking study | MI:0030 | cross-linking study | no cv term id given - auto-mapping ok |
protein cross-linking with a bifunctional reagent | MI:0031 | protein cross-linking with a bifunctional reagent | no cv term id given - auto-mapping ok |
dynamic light scattering | MI:0038 | dynamic light scattering | no cv term id given - auto-mapping ok |
electron-microscopy | MI:0040 | electron microscopy | no cv term id given - auto-mapping ok |
electron paramagnetic resonance | MI:0042 | electron paramagnetic resonance | no cv term id given - auto-mapping ok |
ESR | MI:0042 | electron paramagnetic resonance | no cv term id given - auto-mapping ok |
electron resonance | MI:0043 | electron resonance | no cv term id given - auto-mapping ok |
electron-spin-resonance | MI:0043 | electron resonance | no cv term id given - auto-mapping ok |
experimental interaction detection | MI:0045 | experimental interaction detection | no cv term id given - auto-mapping ok |
experimental knowledge based | MI:0046 | experimental info | no cv term id given - auto-mapping ok - this is the preferred term for this |
filamentous phage display | MI:0048 | filamentous phage display | no cv term id given - auto-mapping ok |
fluorescence technology | MI:0051 | fluorescence technology | no cv term id given - auto-mapping ok |
fluorescence correlation spectroscopy | MI:0052 | fluorescence correlation spectroscopy | no cv term id given - auto-mapping ok |
Fluorescence anisotropy | MI:0053 | fluorescence polarization spectroscopy | no cv term id given - auto-mapping ok |
fluorescence polarization spectroscopy | MI:0053 | fluorescence polarization spectroscopy | no cv term id given - auto-mapping ok |
Flow cytometry | MI:0054 | fluorescence-activated cell sorting | no cv term id given - auto-mapping ok |
fluorescence-activated cell sorting | MI:0054 | fluorescence-activated cell sorting | no cv term id given - auto-mapping ok |
fluorescent resonance energy transfer | MI:0055 | fluorescent resonance energy transfer | no cv term id given - auto-mapping ok |
interaction prediction | MI:0063 | interaction prediction | no cv term id given - auto-mapping ok |
isothermal titration calorimetry | MI:0065 | isothermal titration calorimetry | no cv term id given - auto-mapping ok |
lambda phage display | MI:0066 | lambda phage display | no cv term id given - auto-mapping ok |
light-scattering | MI:0067 | light scattering | no cv term id given - auto-mapping ok |
mass spectrometry studies of complexes | MI:0069 | mass spectrometry studies of complexes | no cv term id given - auto-mapping ok |
equilibrium-dialysis | MI:0071 | molecular sieving | no cv term id given - manual-mapping ok - individual cases should be reviewed |
Gel Filtration | MI:0071 | molecular sieving | no cv term id given - manual-mapping ok - individual cases should be reviewed |
gel-filtration-chromatography | MI:0071 | molecular sieving | no cv term id given - manual-mapping ok - individual cases should be reviewed |
membrane-filtration | MI:0071 | molecular sieving | no cv term id given - manual-mapping ok - individual cases should be reviewed |
nuclear magnetic resonance | MI:0077 | nuclear magnetic resonance | no cv term id given - auto-mapping ok |
hybridization | MI:0079 | other biochemic tech | no cv term id given - auto-mapping ok - individual cases should be reviewed |
phage-display | MI:0084 | phage display | no cv term id given - auto-mapping ok |
protein complementation assay | MI:0090 | protein complementation assay | no cv term id given - auto-mapping ok |
chromatography technology | MI:0091 | chromatography technology | no cv term id given - auto-mapping ok |
reverse ras recruitment system | MI:0097 | reverse ras recruitment system | no cv term id given - auto-mapping ok |
scintillation proximity assay | MI:0099 | scintillation proximity assay | no cv term id given - auto-mapping ok |
static light scattering | MI:0104 | static light scattering | no cv term id given - auto-mapping ok |
surface plasmon resonance | MI:0107 | surface plasmon resonance | no cv term id given - auto-mapping ok |
t7 phage display | MI:0108 | t7 phage display | no cv term id given - auto-mapping ok |
dihydrofolate reductase reconstruction | MI:0111 | dihydrofolate reductase reconstruction | no cv term id given - auto-mapping ok |
ubiquitin reconstruction | MI:0112 | ubiquitin reconstruction | no cv term id given - auto-mapping ok |
Co-crystal Structure | MI:0114 | x-ray | no cv term id given - manual-mapping ok - using biogrids mapping |
x-ray crystallography | MI:0114 | x-ray crystallography | no cv term id given - auto-mapping ok |
x-ray: x-ray crystallography | MI:0114 | x-ray crystallography | no cv term id given - auto-mapping ok |
ion exchange chromatography | MI:0226 | ion exchange chromatography | no cv term id given - auto-mapping ok |
reverse phase chromatography | MI:0227 | reverse phase chromatography | no cv term id given - auto-mapping ok |
green fluorescence protein complementation assay | MI:0229 | green fluorescence protein complementation assay | no cv term id given - auto-mapping ok |
mammalian protein protein interaction trap | MI:0231 | mammalian protein protein interaction trap | no cv term id given - auto-mapping ok |
transcriptional complementation assay | MI:0232 | transcriptional complementation assay | no cv term id given - auto-mapping ok |
blue native page | MI:0276 | blue native page | no cv term id given - auto-mapping ok |
lex-a dimerization assay | MI:0369 | lex-a dimerization assay | no cv term id given - auto-mapping ok |
tox-r dimerization assay | MI:0370 | tox-r dimerization assay | no cv term id given - auto-mapping ok |
two hybrid pooling approach | MI:0398 | two hybrid pooling approach | no cv term id given - auto-mapping ok |
two hybrid fragment pooling approach | MI:0399 | two hybrid fragment pooling approach | no cv term id given - auto-mapping ok |
affinity technology | MI:0400 | affinity technology | no cv term id given - auto-mapping ok |
chromatin immunoprecipitation assays | MI:0402 | chromatin immunoprecipitation assay | no cv term id given - auto-mapping ok |
comigration in non denaturing gel electrophoresis | MI:0404 | comigration in non denaturing gel electrophoresis | no cv term id given - auto-mapping ok |
competition-binding | MI:0405 | competition binding | no cv term id given - manual-mapping ok |
electron tomography | MI:0410 | electron tomography | no cv term id given - auto-mapping ok |
enzyme linked immunosorbent assay | MI:0411 | enzyme linked immunosorbent assay | no cv term id given - auto-mapping ok |
electrophoretic mobility supershift assay | MI:0412 | electrophoretic mobility supershift assay | no cv term id given - auto-mapping ok |
electrophoretic mobility shift assay | MI:0413 | electrophoretic mobility shift assay | no cv term id given - auto-mapping ok |
Biochemical Activity | MI:0415 | enzymatic studies | no cv term id given - manual-mapping ok - using biogrids mapping |
fluorescence microscopy | MI:0416 | fluorescence microscopy | no cv term id given - auto-mapping ok |
gtp hydrolisis | MI:0419 | gtpase assay | no cv term id given - auto-mapping ok |
kinase homogeneous time resolved fluorescence | MI:0420 | kinase homogeneous time resolved fluorescence | no cv term id given - auto-mapping ok |
in-gel kinase assay | MI:0423 | in-gel kinase assay | no cv term id given - auto-mapping ok |
kinase scintillation proximity assay | MI:0425 | kinase scintillation proximity assay | no cv term id given - auto-mapping ok |
Co-localization | MI:0428 | imaging techniques | no cv term id given - manual-mapping ok - using biogrids mapping |
coloc by immunost | MI:0428 | imaging techniques | no cv term id given - manual-mapping ok |
coloc by immunost. | MI:0428 | imaging techniques | no cv term id given - manual-mapping ok |
colocalization | MI:0428 | imaging techniques | no cv term id given - manual-mapping ok |
colocalization/visualisation technologies | MI:0428 | imaging techniques | no cv term id given - manual-mapping ok |
immunostaining | MI:0428 | imaging techniques | no cv term id given - manual-mapping ok |
one-hybrid | MI:0432 | one hybrid | no cv term id given - auto-mapping ok |
yeast one hybrid | MI:0432 | one hybrid | no cv term id given - auto-mapping ok |
homogeneous time resolved fluorescence | MI:0510 | homogeneous time resolved fluorescence | no cv term id given - auto-mapping ok |
homogeneous time-resolved fluorescence | MI:0510 | no cv term id given - auto-mapping ok | |
methyltransferase assay | MI:0515 | methyltransferase assay | no cv term id given - auto-mapping ok |
methyltransferase radiometric assay | MI:0516 | methyltransferase radiometric assay | no cv term id given - auto-mapping ok |
enzymatic footprinting | MI:0605 | enzymatic footprinting | no cv term id given - auto-mapping ok |
lambda repressor two hybrid | MI:0655 | lambda repressor two hybrid | no cv term id given - auto-mapping ok |
systematic evolution of ligands by exponential enrichment | MI:0657 | systematic evolution of ligands by exponential enrichment | no cv term id given - auto-mapping ok |
tandem affinity purification | MI:0676 | tandem affinity purification | no cv term id given - auto-mapping ok |
not-specified | MI:0686 | unspecified | no cv term id given - manual-mapping ok |
other | MI:0686 | unspecified | no cv term id given - manual-mapping ok |
sandwich immunoassay | MI:0695 | sandwich immunoassay | no cv term id given - auto-mapping ok |
dna directed dna polymerase assay | MI:0697 | dna directed dna polymerase assay | no cv term id given - auto-mapping ok |
rna directed rna polymerase assay | MI:0700 | rna directed rna polymerase assay | no cv term id given - auto-mapping ok |
gal4 vp16 complementation | MI:0728 | gal4 vp16 complementation | no cv term id given - auto-mapping ok |
comigration in gel electrophoresis | MI:0807 | comigration in gel electrophoresis | no cv term id given - auto-mapping ok |
comigration in sds page | MI:0808 | comigration in sds page | no cv term id given - auto-mapping ok |
bimolecular fluorescence complementation | MI:0809 | bimolecular fluorescence complementation | no cv term id given - auto-mapping ok |
protease accessibility laddering | MI:0814 | protease accessibility laddering | no cv term id given - auto-mapping ok |
x-ray fiber diffraction | MI:0825 | x-ray fiber diffraction | no cv term id given - auto-mapping ok |
x ray scattering | MI:0826 | x ray scattering | no cv term id given - auto-mapping ok |
phosphotransfer assay | MI:0841 | phosphotransfer assay | no cv term id given - auto-mapping ok |
immunodepleted coimmunoprecipitation | MI:0858 | immunodepleted coimmunoprecipitation | no cv term id given - auto-mapping ok |
immunodepleted coip | MI:0858 | immunodepleted coimmunoprecipitation | no cv term id given - auto-mapping ok |
intermolecular force | MI:0859 | intermolecular force | no cv term id given - auto-mapping ok |
atomic force microscopy | MI:0872 | atomic force microscopy | no cv term id given - auto-mapping ok |
atomic-force-microscopy | MI:0872 | AFM | no cv term id given - manual-mapping ok |
neutron diffraction | MI:0893 | neutron diffraction | no cv term id given - auto-mapping ok |
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