Difference between revisions of "Statistics"
From irefindex
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== Statistics test page: == | == Statistics test page: == | ||
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| + | This is a only a sample, column headings and order will change ! | ||
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| 146|| MPPI ||1814||1695||119||119||1814||0||93.44||827||48.79 | | 146|| MPPI ||1814||1695||119||119||1814||0||93.44||827||48.79 | ||
| + | |- | ||
| + | | | ||
| + | |} | ||
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| + | |||
| + | ------------ | ||
| + | |||
| + | {| {{table}} | ||
| + | | align="center" style="background:#f0f0f0;"|'''+--------+----------+------------+--------+---------+------+--------+-------+------+--------+------+-------+--------------------+-----------+-------------+''' | ||
| + | |- | ||
| + | | | score | proteins | percentage | bind | biogrid | dip | intact | mint | hprd | ophid | miip | mpact | Bin_score | Str_score | score_class | | ||
| + | |- | ||
| + | | +--------+----------+------------+--------+---------+------+--------+-------+------+--------+------+-------+--------------------+-----------+-------------+ | ||
| + | |- | ||
| + | | | 1 | 523340 | 82.6130 | 232755 | 7313 | 0 | 81887 | 74939 | 0 | 126446 | 0 | 0 | 000000000000000001 | P | 1 | | ||
| + | |- | ||
| + | | | 2 | 8209 | 1.2958 | 0 | 7754 | 0 | 219 | 236 | 0 | 0 | 0 | 0 | 000000000000000010 | S | 1 | | ||
| + | |- | ||
| + | | | 5 | 19850 | 3.1335 | 0 | 0 | 0 | 669 | 346 | 0 | 18835 | 0 | 0 | 000000000000000101 | PU | 2 | | ||
| + | |- | ||
| + | | | 6 | 286 | 0.0451 | 0 | 275 | 0 | 6 | 5 | 0 | 0 | 0 | 0 | 000000000000000110 | SU | -1 | | ||
| + | |- | ||
| + | | | 17 | 19265 | 3.0411 | 11825 | 0 | 0 | 2504 | 1742 | 0 | 122 | 3072 | 0 | 000000000000010001 | PT | 3 | | ||
| + | |- | ||
| + | | | 18 | 1383 | 0.2183 | 0 | 1380 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 000000000000010010 | ST | 3 | | ||
| + | |- | ||
| + | | | 21 | 180 | 0.0284 | 0 | 0 | 0 | 27 | 6 | 0 | 5 | 142 | 0 | 000000000000010101 | PUT | -1 | | ||
| + | |- | ||
| + | | | 65 | 9244 | 1.4592 | 8091 | 1134 | 0 | 0 | 19 | 0 | 0 | 0 | 0 | 000000000001000001 | PD | 1 | | ||
| + | |- | ||
| + | | | 66 | 6 | 0.0009 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000000000001000010 | SD | -1 | | ||
| + | |- | ||
| + | | | 81 | 1483 | 0.2341 | 1483 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000000000001010001 | PTD | -1 | | ||
| + | |- | ||
| + | | | 129 | 488 | 0.0770 | 473 | 1 | 0 | 14 | 0 | 0 | 0 | 0 | 0 | 000000000010000001 | PM | -1 | | ||
| + | |- | ||
| + | | | 130 | 1190 | 0.1879 | 0 | 1190 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000000000010000010 | SM | 1 | | ||
| + | |- | ||
| + | | | 145 | 199 | 0.0314 | 132 | 0 | 0 | 0 | 0 | 0 | 0 | 67 | 0 | 000000000010010001 | PTM | -1 | | ||
| + | |- | ||
| + | | | 146 | 3 | 0.0005 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000000000010010010 | STM | -1 | | ||
| + | |- | ||
| + | | | 773 | 6 | 0.0009 | 0 | 0 | 0 | 5 | 1 | 0 | 0 | 0 | 0 | 000000001100000101 | PUO+ | 2 | | ||
| + | |- | ||
| + | | | 774 | 1 | 0.0002 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 000000001100000110 | SUO+ | -1 | | ||
| + | |- | ||
| + | | | 789 | 15 | 0.0024 | 0 | 0 | 0 | 15 | 0 | 0 | 0 | 0 | 0 | 000000001100010101 | PUTO+ | -1 | | ||
| + | |- | ||
| + | | | 4354 | 8843 | 1.3959 | 0 | 8843 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000001000100000010 | SL+ | 5 | | ||
| + | |- | ||
| + | | | 4357 | 84 | 0.0133 | 0 | 0 | 0 | 0 | 0 | 0 | 84 | 0 | 0 | 000001000100000101 | PUL+ | -1 | | ||
| + | |- | ||
| + | | | 4373 | 187 | 0.0295 | 0 | 0 | 0 | 8 | 1 | 0 | 0 | 178 | 0 | 000001000100010101 | PUTL+ | 5 | | ||
| + | |- | ||
| + | | | 5378 | 1 | 0.0002 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 000001010100000010 | SXL+ | -1 | | ||
| + | |- | ||
| + | | | 5381 | 34 | 0.0054 | 0 | 0 | 0 | 10 | 5 | 0 | 19 | 0 | 0 | 000001010100000101 | PUXL+ | -1 | | ||
| + | |- | ||
| + | | | 8193 | 19 | 0.0030 | 0 | 2 | 0 | 17 | 0 | 0 | 0 | 0 | 0 | 000010000000000001 | PI | -1 | | ||
| + | |- | ||
| + | | | 8194 | 11457 | 1.8086 | 11287 | 170 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000010000000000010 | SI | -1 | | ||
| + | |- | ||
| + | | | 8210 | 834 | 0.1317 | 826 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000010000000010010 | STI | -1 | | ||
| + | |- | ||
| + | | | 8257 | 40 | 0.0063 | 0 | 0 | 0 | 40 | 0 | 0 | 0 | 0 | 0 | 000010000001000001 | PDI | -1 | | ||
| + | |- | ||
| + | | | 8258 | 1066 | 0.1683 | 1044 | 22 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000010000001000010 | SDI | -1 | | ||
| + | |- | ||
| + | | | 8273 | 13 | 0.0021 | 0 | 0 | 0 | 13 | 0 | 0 | 0 | 0 | 0 | 000010000001010001 | PTDI | -1 | | ||
| + | |- | ||
| + | | | 8274 | 66 | 0.0104 | 29 | 37 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000010000001010010 | STDI | -1 | | ||
| + | |- | ||
| + | | | 16385 | 246 | 0.0388 | 0 | 0 | 0 | 246 | 0 | 0 | 0 | 0 | 0 | 000100000000000001 | PE | 2 | | ||
| + | |- | ||
| + | | | 16386 | 5434 | 0.8578 | 5434 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000100000000000010 | SE | -1 | | ||
| + | |- | ||
| + | | | 16401 | 2 | 0.0003 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 000100000000010001 | PTE | -1 | | ||
| + | |- | ||
| + | | | 16402 | 316 | 0.0499 | 316 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000100000000010010 | STE | -1 | | ||
| + | |- | ||
| + | | | 65537 | 8727 | 1.3776 | 2322 | 0 | 0 | 2978 | 2763 | 0 | 653 | 11 | 0 | 010000000000000001 | PN | 6 | | ||
| + | |- | ||
| + | | | 65553 | 44 | 0.0069 | 4 | 0 | 0 | 38 | 0 | 0 | 0 | 2 | 0 | 010000000000010001 | PTN | -1 | | ||
| + | |- | ||
| + | | | 65601 | 801 | 0.1264 | 799 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 010000000001000001 | PDN | -1 | | ||
| + | |- | ||
| + | | | 65681 | 2 | 0.0003 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 010000000010010001 | PTMN | -1 | | ||
| + | |- | ||
| + | | | 81921 | 234 | 0.0369 | 0 | 0 | 0 | 234 | 0 | 0 | 0 | 0 | 0 | 010100000000000001 | PEN | -1 | | ||
| + | |- | ||
| + | | | 81922 | 4636 | 0.7318 | 4635 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 010100000000000010 | SEN | 6 | | ||
| + | |- | ||
| + | | | 81937 | 18 | 0.0028 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | 0 | 010100000000010001 | PTEN | -1 | | ||
| + | |- | ||
| + | | | 81938 | 22 | 0.0035 | 22 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 010100000000010010 | STEN | -1 | | ||
| + | |- | ||
| + | | | 86274 | 1 | 0.0002 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 010101000100000010 | SLEN+ | -1 | | ||
| + | |- | ||
| + | | | 131073 | 2 | 0.0003 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 100000000000000001 | PQ | -1 | | ||
| + | |- | ||
| + | | | 131077 | 1 | 0.0002 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 100000000000000101 | PUQ | -1 | | ||
| + | |- | ||
| + | | | 131089 | 24 | 0.0038 | 0 | 0 | 0 | 24 | 0 | 0 | 0 | 0 | 0 | 100000000000010001 | PTQ | 5 | | ||
| + | |- | ||
| + | | +--------+----------+------------+--------+---------+------+--------+-------+------+--------+------+-------+--------------------+-----------+-------------+ | ||
|- | |- | ||
| | | | ||
|} | |} | ||
Revision as of 12:52, 21 October 2008
Statistics test page:
This is a only a sample, column headings and order will change !
| SouceDB | source | Proteins | Assignments | Ambiguous | N_scores | Arbitrary | Unassigned | unique_rogs |
| 1 | bind | 285482 | 273695 | 0 | 7782 | 0 | 4005 | 40766 |
| 2 | grid | 28218 | 19295 | 8844 | 3 | 8843 | 77 | 26945 |
| 5 | intact | 89190 | 85695 | 40 | 3250 | 19 | 226 | 39678 |
| 6 | mint | 80543 | 77294 | 7 | 2764 | 6 | 479 | 28055 |
| 146 | MPPI | 3628 | 3281 | 178 | 33 | 178 | 136 | 857 |
| 16 | ophid | 146423 | 145408 | 103 | 653 | 103 | 259 | 9663 |
| Total | all | 633484 | 604668 | 9172 | 14485 | 9149 | 5182 | 77745 |
| sourceid | sourcedb | total | with_RIGID | no_RIGID | PPI_without_RIGID | PPI | none_PPI | percent_asign | uniq_RIGID | uniq_RIGID_perc |
| 1 | bind | 193648 | 91234 | 102414 | 2723 | 93957 | 99691 | 97.1 | 62860 | 68.9 |
| 2 | grid | 225470 | 225208 | 262 | 262 | 225470 | 0 | 99.88 | 150619 | 66.88 |
| 5 | intact | 111572 | 110598 | 974 | 410 | 111008 | 564 | 99.63 | 97012 | 87.72 |
| 6 | mint | 104847 | 103522 | 1325 | 1325 | 104847 | 0 | 98.74 | 73733 | 71.22 |
| 16 | ophid | 73257 | 72907 | 350 | 350 | 73257 | 0 | 99.52 | 47318 | 64.9 |
| 146 | MPPI | 1814 | 1695 | 119 | 119 | 1814 | 0 | 93.44 | 827 | 48.79 |
| +--------+----------+------------+--------+---------+------+--------+-------+------+--------+------+-------+--------------------+-----------+-------------+ |
| score | proteins | percentage | bind | biogrid | dip | intact | mint | hprd | ophid | miip | mpact | Bin_score | Str_score | score_class | |
| +--------+----------+------------+--------+---------+------+--------+-------+------+--------+------+-------+--------------------+-----------+-------------+ |
| 1 | 523340 | 82.6130 | 232755 | 7313 | 0 | 81887 | 74939 | 0 | 126446 | 0 | 0 | 000000000000000001 | P | 1 | |
| 2 | 8209 | 1.2958 | 0 | 7754 | 0 | 219 | 236 | 0 | 0 | 0 | 0 | 000000000000000010 | S | 1 | |
| 5 | 19850 | 3.1335 | 0 | 0 | 0 | 669 | 346 | 0 | 18835 | 0 | 0 | 000000000000000101 | PU | 2 | |
| 6 | 286 | 0.0451 | 0 | 275 | 0 | 6 | 5 | 0 | 0 | 0 | 0 | 000000000000000110 | SU | -1 | |
| 17 | 19265 | 3.0411 | 11825 | 0 | 0 | 2504 | 1742 | 0 | 122 | 3072 | 0 | 000000000000010001 | PT | 3 | |
| 18 | 1383 | 0.2183 | 0 | 1380 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 000000000000010010 | ST | 3 | |
| 21 | 180 | 0.0284 | 0 | 0 | 0 | 27 | 6 | 0 | 5 | 142 | 0 | 000000000000010101 | PUT | -1 | |
| 65 | 9244 | 1.4592 | 8091 | 1134 | 0 | 0 | 19 | 0 | 0 | 0 | 0 | 000000000001000001 | PD | 1 | |
| 66 | 6 | 0.0009 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000000000001000010 | SD | -1 | |
| 81 | 1483 | 0.2341 | 1483 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000000000001010001 | PTD | -1 | |
| 129 | 488 | 0.0770 | 473 | 1 | 0 | 14 | 0 | 0 | 0 | 0 | 0 | 000000000010000001 | PM | -1 | |
| 130 | 1190 | 0.1879 | 0 | 1190 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000000000010000010 | SM | 1 | |
| 145 | 199 | 0.0314 | 132 | 0 | 0 | 0 | 0 | 0 | 0 | 67 | 0 | 000000000010010001 | PTM | -1 | |
| 146 | 3 | 0.0005 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000000000010010010 | STM | -1 | |
| 773 | 6 | 0.0009 | 0 | 0 | 0 | 5 | 1 | 0 | 0 | 0 | 0 | 000000001100000101 | PUO+ | 2 | |
| 774 | 1 | 0.0002 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 000000001100000110 | SUO+ | -1 | |
| 789 | 15 | 0.0024 | 0 | 0 | 0 | 15 | 0 | 0 | 0 | 0 | 0 | 000000001100010101 | PUTO+ | -1 | |
| 4354 | 8843 | 1.3959 | 0 | 8843 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000001000100000010 | SL+ | 5 | |
| 4357 | 84 | 0.0133 | 0 | 0 | 0 | 0 | 0 | 0 | 84 | 0 | 0 | 000001000100000101 | PUL+ | -1 | |
| 4373 | 187 | 0.0295 | 0 | 0 | 0 | 8 | 1 | 0 | 0 | 178 | 0 | 000001000100010101 | PUTL+ | 5 | |
| 5378 | 1 | 0.0002 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 000001010100000010 | SXL+ | -1 | |
| 5381 | 34 | 0.0054 | 0 | 0 | 0 | 10 | 5 | 0 | 19 | 0 | 0 | 000001010100000101 | PUXL+ | -1 | |
| 8193 | 19 | 0.0030 | 0 | 2 | 0 | 17 | 0 | 0 | 0 | 0 | 0 | 000010000000000001 | PI | -1 | |
| 8194 | 11457 | 1.8086 | 11287 | 170 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000010000000000010 | SI | -1 | |
| 8210 | 834 | 0.1317 | 826 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000010000000010010 | STI | -1 | |
| 8257 | 40 | 0.0063 | 0 | 0 | 0 | 40 | 0 | 0 | 0 | 0 | 0 | 000010000001000001 | PDI | -1 | |
| 8258 | 1066 | 0.1683 | 1044 | 22 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000010000001000010 | SDI | -1 | |
| 8273 | 13 | 0.0021 | 0 | 0 | 0 | 13 | 0 | 0 | 0 | 0 | 0 | 000010000001010001 | PTDI | -1 | |
| 8274 | 66 | 0.0104 | 29 | 37 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000010000001010010 | STDI | -1 | |
| 16385 | 246 | 0.0388 | 0 | 0 | 0 | 246 | 0 | 0 | 0 | 0 | 0 | 000100000000000001 | PE | 2 | |
| 16386 | 5434 | 0.8578 | 5434 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000100000000000010 | SE | -1 | |
| 16401 | 2 | 0.0003 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 000100000000010001 | PTE | -1 | |
| 16402 | 316 | 0.0499 | 316 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 000100000000010010 | STE | -1 | |
| 65537 | 8727 | 1.3776 | 2322 | 0 | 0 | 2978 | 2763 | 0 | 653 | 11 | 0 | 010000000000000001 | PN | 6 | |
| 65553 | 44 | 0.0069 | 4 | 0 | 0 | 38 | 0 | 0 | 0 | 2 | 0 | 010000000000010001 | PTN | -1 | |
| 65601 | 801 | 0.1264 | 799 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 010000000001000001 | PDN | -1 | |
| 65681 | 2 | 0.0003 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 010000000010010001 | PTMN | -1 | |
| 81921 | 234 | 0.0369 | 0 | 0 | 0 | 234 | 0 | 0 | 0 | 0 | 0 | 010100000000000001 | PEN | -1 | |
| 81922 | 4636 | 0.7318 | 4635 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 010100000000000010 | SEN | 6 | |
| 81937 | 18 | 0.0028 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | 0 | 010100000000010001 | PTEN | -1 | |
| 81938 | 22 | 0.0035 | 22 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 010100000000010010 | STEN | -1 | |
| 86274 | 1 | 0.0002 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 010101000100000010 | SLEN+ | -1 | |
| 131073 | 2 | 0.0003 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 100000000000000001 | PQ | -1 | |
| 131077 | 1 | 0.0002 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 100000000000000101 | PUQ | -1 | |
| 131089 | 24 | 0.0038 | 0 | 0 | 0 | 24 | 0 | 0 | 0 | 0 | 0 | 100000000000010001 | PTQ | 5 | |
| +--------+----------+------------+--------+---------+------+--------+-------+------+--------+------+-------+--------------------+-----------+-------------+ |
