Difference between revisions of "MBV9100"
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− | ==MBV9100: Molecular Biology Research course== | + | ==MBV9100: Molecular Biology Research course. Autumn 2011. == |
Course page: http://www.uio.no/studier/emner/matnat/molbio/MBV9100BTS/index.xml | Course page: http://www.uio.no/studier/emner/matnat/molbio/MBV9100BTS/index.xml | ||
+ | |||
General information: http://www.biotek.uio.no/events/courses_workshops/2011/MBV9100BTS.html | General information: http://www.biotek.uio.no/events/courses_workshops/2011/MBV9100BTS.html | ||
==Place and time== | ==Place and time== | ||
− | Time and place: | + | Time and place: |
+ | |||
+ | Room 10. Oslo Innovation Center (Forskningsparken). | ||
+ | |||
+ | Mon 31st of Oct - Thursday 3rd of Nov, 09 - 1600 Room 10 | ||
+ | Friday 4th of Nov 09-1200 and then 1330-1600 Room 10 | ||
− | Room 10 | + | Mon 7th of Nov - Thursday 10th of Nov, 09-1600 Room 10. |
+ | Friday the 11th of Nov 09-1200 and 1330-1600 Room 10 | ||
+ | Contacts (room opening and audio visual) | ||
+ | |||
+ | If the room is not open in the morning, please contact | ||
+ | Carlos Rodriguez at 22840500. | ||
+ | |||
+ | If there are problems with the laptop or data projector, please contact | ||
+ | Melaku Tadesse at 22840537. | ||
+ | |||
+ | Course coordinator: | ||
+ | Ian Donaldson 99115149 | ||
+ | |||
+ | Laptop: | ||
+ | |||
+ | 1. password is on the laptop (second yellow sticker) | ||
+ | 2. use Function key (Fn) + F7 key to change output to screen + laptop | ||
==Programme== | ==Programme== | ||
+ | |||
+ | {| class="wikitable" style="text-align:left" cellpadding="5" | ||
+ | !width="20%"| | ||
+ | !width="27%"| | ||
+ | !width="27%"| | ||
+ | !width="27%"| | ||
+ | |- | ||
+ | | align="center" style="background:grey;" colspan="4"|'''Week 1: Monday, October 31st - Friday, November 4th''' | ||
+ | |- | ||
+ | | Day of the week ||Session 1||Session 2||Session 3 | ||
+ | |- | ||
+ | | ||09:00 – 10:45 ||11:00 – 12:45 ||14:00 – 15:45 | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | Mon Oct. 31st | ||
+ | ||Genome biology of Cancer | ||
+ | ||Reversible protein glycosylation in health and disease-The O-GlcNAc modification. | ||
+ | ||Exploring the systems biology of breast cancer. | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | ||Rolf I Skotheim ||Line M Grønning Wang ||Anne-Lise Børresen Dale | ||
+ | |- | ||
+ | | Tue Nov 1st | ||
+ | ||Structural Biology | ||
+ | ||TBA | ||
+ | ||Drosophila melanogaster as a model system for cell signaling and disease | ||
+ | |- | ||
+ | | ||Ute Krengel ||TBA ||Tor Erik Rusten | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | Wed Nov 2nd | ||
+ | ||ROS signalling and mitochondrial homeostasis | ||
+ | ||Harmful and useful macromolecular methylations - formation and removal. | ||
+ | ||Role of amino acid transporters in synaptic transmission and metabolism | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | ||Lars Eide ||Pål Falnes||Farrukh Chaudhry | ||
+ | |- | ||
+ | | Thur Nov 3rd||Stem cells: molecular biology and clinical applications. ||C. elegans as a model system of DNA repair ||Phospho-flow/multi-color flow cytometry | ||
+ | |- | ||
+ | | ||Jan Brinchmann ||Hilde Nilsen ||June Myklebust | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | Fri Nov 4th ||1. Session ||2. Session ||3. Session | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | ||09:00 – 10:45 ||11:00 – 12:00||13:30 – 15:45 | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | ||Yeast as a model system and the cell cycle ||Student presentations||The model system Arabidopsis thaliana | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | ||Jorrit Enserink ||Note: early lunch ||Reidunn Aalen | ||
+ | |- | ||
+ | | |||||| | ||
+ | |- | ||
+ | | align="center" style="background: grey;" colspan="4"|Week 2: Monday, November 7th - Friday, November 11th. | ||
+ | |- | ||
+ | | ||1. Session ||2. Session ||3. Session | ||
+ | |- | ||
+ | | ||09:00 – 10:45 ||11:00 – 12:45 ||14:00 – 15:45 | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | Mon Nov 7th | ||
+ | ||Chromatin IP to study transcriptional control | ||
+ | ||RNAi in functional genomics and therapeutics | ||
+ | ||Optical in vivo imaging of gene expression | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | ||Ian Mills || Torgeir Holen ||Harald Carlsen | ||
+ | |- | ||
+ | | Tue Nov 8th ||Fighting disease by selective autophagy of aggregate-prone proteins ||Tools for high-throughput genomic research: mesenchymal biology in health and disease. ||Two-photon imaging of glial cell function in the living brain: roles of aquaporins | ||
+ | |- | ||
+ | | ||Anne Simonsen ||Leonardo A. Meza-Zepeda ||Erlend A. Nagelhus | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | Wed Nov 9th ||Proteomics of cell death ||PKC in vivo analysis by transgenic mouse models ||Will gene expression maps revolutionize brain mapping research? | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | ||Bernd Thiede ||Michael Leitges ||Jan G. Bjaalie | ||
+ | |- | ||
+ | | Thur Nov 10th || Student presentations|||| | ||
+ | |- | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | | Fri Nov 11th || Writing Day (lunch between 12:00 - 13:30)|||| | ||
+ | |- | ||
+ | |} | ||
+ | |||
+ | ==Journal== | ||
+ | You are required to write a journal during the whole course. The journal shall consist of daily summaries and comments upon the lectures. | ||
+ | There is no formal requirement for number of words - your notes should make it clear that you understood the main points of the lecture. You may also wish to add notes on papers you could read to follow up on the topic. Notes will be returned. | ||
+ | |||
+ | The journal should be submitted by Monday November 14th to ian.donaldson@biotek.uio.no in PDF format. If you cannot provide an electronic version, please make arrangements with Ian to deliver your journal in person. | ||
+ | |||
+ | ==Student presentation== | ||
+ | Presentations should be accompanied by slides (circa 15-20) describing your Ph.D. thesis work - problem area, hypotheses, methods, results (if any to date). Presentations should be 15-20 minutes. Questions can take an additional 5 minutes. | ||
+ | |||
+ | ==Course evaluation== | ||
+ | You must fill out a course evaluation before December 1st, 2011. | ||
+ | |||
+ | Participation is mandatory. Answers are anonymous. | ||
+ | |||
+ | See https://nettskjema.uio.no/answer.html?fid=47736&lang=en | ||
+ | |||
+ | Your answers must be entered in one session (you cant save a partially filled out form) so keep notes and complete the form on the last day of the course. | ||
+ | |||
+ | |||
+ | |||
+ | |||
+ | <!-- | ||
+ | {| class="wikitable" style="text-align:left" cellpadding="5" | ||
+ | !width="20%"| | ||
+ | !width="27%"| | ||
+ | !width="27%"| | ||
+ | !width="27%"| | ||
+ | |- | ||
+ | | align="center" style="background:grey;" colspan="4"|'''Week 1: Monday, October 31st - Friday, November 4th''' | ||
+ | |- | ||
+ | | Day of the week ||Session 1||Session 2||Session 3 | ||
+ | |- | ||
+ | | ||09:00 – 10:45 ||11:00 – 12:45 ||14:00 – 15:45 | ||
+ | |-style="background: lightgrey; color: black" | ||
+ | |||
+ | |||
+ | |||
+ | |- | ||
+ | | align="center" style="background: grey;" colspan="4"|Week 2: Monday, November 7th - Friday, November 11th. | ||
+ | |- | ||
+ | |||
+ | |} | ||
+ | --> | ||
+ | |||
+ | http://excel2wiki.net/index.php | ||
+ | http://en.wikipedia.org/wiki/Help:Table | ||
+ | |||
+ | ==Archive== | ||
+ | http://donaldson.uio.no/wiki/MNBTS_9000_(2008) |
Latest revision as of 09:27, 25 October 2012
Contents
MBV9100: Molecular Biology Research course. Autumn 2011.
Course page: http://www.uio.no/studier/emner/matnat/molbio/MBV9100BTS/index.xml
General information: http://www.biotek.uio.no/events/courses_workshops/2011/MBV9100BTS.html
Place and time
Time and place:
Room 10. Oslo Innovation Center (Forskningsparken).
Mon 31st of Oct - Thursday 3rd of Nov, 09 - 1600 Room 10 Friday 4th of Nov 09-1200 and then 1330-1600 Room 10
Mon 7th of Nov - Thursday 10th of Nov, 09-1600 Room 10. Friday the 11th of Nov 09-1200 and 1330-1600 Room 10
Contacts (room opening and audio visual)
If the room is not open in the morning, please contact
Carlos Rodriguez at 22840500.
If there are problems with the laptop or data projector, please contact
Melaku Tadesse at 22840537.
Course coordinator:
Ian Donaldson 99115149
Laptop:
1. password is on the laptop (second yellow sticker) 2. use Function key (Fn) + F7 key to change output to screen + laptop
Programme
Week 1: Monday, October 31st - Friday, November 4th | |||
Day of the week | Session 1 | Session 2 | Session 3 |
09:00 – 10:45 | 11:00 – 12:45 | 14:00 – 15:45 | |
Mon Oct. 31st | Genome biology of Cancer | Reversible protein glycosylation in health and disease-The O-GlcNAc modification. | Exploring the systems biology of breast cancer. |
Rolf I Skotheim | Line M Grønning Wang | Anne-Lise Børresen Dale | |
Tue Nov 1st | Structural Biology | TBA | Drosophila melanogaster as a model system for cell signaling and disease |
Ute Krengel | TBA | Tor Erik Rusten | |
Wed Nov 2nd | ROS signalling and mitochondrial homeostasis | Harmful and useful macromolecular methylations - formation and removal. | Role of amino acid transporters in synaptic transmission and metabolism |
Lars Eide | Pål Falnes | Farrukh Chaudhry | |
Thur Nov 3rd | Stem cells: molecular biology and clinical applications. | C. elegans as a model system of DNA repair | Phospho-flow/multi-color flow cytometry |
Jan Brinchmann | Hilde Nilsen | June Myklebust | |
Fri Nov 4th | 1. Session | 2. Session | 3. Session |
09:00 – 10:45 | 11:00 – 12:00 | 13:30 – 15:45 | |
Yeast as a model system and the cell cycle | Student presentations | The model system Arabidopsis thaliana | |
Jorrit Enserink | Note: early lunch | Reidunn Aalen | |
Week 2: Monday, November 7th - Friday, November 11th. | |||
1. Session | 2. Session | 3. Session | |
09:00 – 10:45 | 11:00 – 12:45 | 14:00 – 15:45 | |
Mon Nov 7th | Chromatin IP to study transcriptional control | RNAi in functional genomics and therapeutics | Optical in vivo imaging of gene expression |
Ian Mills | Torgeir Holen | Harald Carlsen | |
Tue Nov 8th | Fighting disease by selective autophagy of aggregate-prone proteins | Tools for high-throughput genomic research: mesenchymal biology in health and disease. | Two-photon imaging of glial cell function in the living brain: roles of aquaporins |
Anne Simonsen | Leonardo A. Meza-Zepeda | Erlend A. Nagelhus | |
Wed Nov 9th | Proteomics of cell death | PKC in vivo analysis by transgenic mouse models | Will gene expression maps revolutionize brain mapping research? |
Bernd Thiede | Michael Leitges | Jan G. Bjaalie | |
Thur Nov 10th | Student presentations | ||
Fri Nov 11th | Writing Day (lunch between 12:00 - 13:30) |
Journal
You are required to write a journal during the whole course. The journal shall consist of daily summaries and comments upon the lectures. There is no formal requirement for number of words - your notes should make it clear that you understood the main points of the lecture. You may also wish to add notes on papers you could read to follow up on the topic. Notes will be returned.
The journal should be submitted by Monday November 14th to ian.donaldson@biotek.uio.no in PDF format. If you cannot provide an electronic version, please make arrangements with Ian to deliver your journal in person.
Student presentation
Presentations should be accompanied by slides (circa 15-20) describing your Ph.D. thesis work - problem area, hypotheses, methods, results (if any to date). Presentations should be 15-20 minutes. Questions can take an additional 5 minutes.
Course evaluation
You must fill out a course evaluation before December 1st, 2011.
Participation is mandatory. Answers are anonymous.
See https://nettskjema.uio.no/answer.html?fid=47736&lang=en
Your answers must be entered in one session (you cant save a partially filled out form) so keep notes and complete the form on the last day of the course.
http://excel2wiki.net/index.php http://en.wikipedia.org/wiki/Help:Table