Difference between revisions of "iRefIndex"
(24 intermediate revisions by 2 users not shown) | |||
Line 1: | Line 1: | ||
__NOTOC__ | __NOTOC__ | ||
− | iRefIndex provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB and | + | iRefIndex provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB, MPPI, Reactome, VirHostnet, and QuickGO. |
{|class="wikitable" style="text-align:left; clear: left" border="0" cellpadding="10" | {|class="wikitable" style="text-align:left; clear: left" border="0" cellpadding="10" | ||
Line 19: | Line 19: | ||
| style="vertical-align: top" | | | style="vertical-align: top" | | ||
=== [[README_MITAB2.6_for_iRefIndex|Download]] === | === [[README_MITAB2.6_for_iRefIndex|Download]] === | ||
− | Download version | + | Download version 20.0 of the iRefIndex in PSI-MITAB tab-delimited format. |
Line 34: | Line 34: | ||
<!-- iRefIndex more link and text --> | <!-- iRefIndex more link and text --> | ||
| style="vertical-align: top" | | | style="vertical-align: top" | | ||
+ | |||
=== [[ iRefIndex more | More about iRefIndex ]] === | === [[ iRefIndex more | More about iRefIndex ]] === | ||
Line 54: | Line 55: | ||
=== [[ Donaldson Research | More about Donaldson Research ]] === | === [[ Donaldson Research | More about Donaldson Research ]] === | ||
− | Donaldson Research is | + | Support for updates to and use of iRefIndex can be provided by Donaldson Research. |
+ | |||
+ | |||
+ | <!--More about VIB row--> | ||
+ | |- | ||
+ | |||
+ | <!-- VIB logo --> | ||
+ | |<imagemap> | ||
+ | Image:donaldson_research_logo.png|80x80px | ||
+ | default [[ Donaldson Research ]] | ||
+ | desc none | ||
+ | </imagemap> | ||
+ | |||
+ | <!-- VIB more link and text --> | ||
+ | | style="vertical-align: top" | | ||
+ | |||
+ | === [http://irefindex.vib.be More about the VIB Bioinformatics Core] === | ||
+ | |||
+ | The iRefIndex site is now hosted at the VIB Bioinformatics Core including [http://www.ebi.ac.uk/Tools/webservices/psicquic/registry/registry?action=STATUS PSICQUIC webservices] that can be accessed [https://irefindex.vib.be/webservices here] using either SOAP or REST. | ||
+ | |||
+ | |} | ||
+ | |||
+ | |||
+ | |||
+ | ---- | ||
+ | |||
+ | == Contact == | ||
+ | |||
+ | If you have comments, questions or would like to be added to a list receiving news of updates, please write to us at: | ||
+ | VIB Bioinformatics core [mailto:bits@vib.be] or Ian Donaldson [mailto:ian@donaldsonresearch.com email me] | ||
+ | |||
+ | ---- | ||
+ | [[Category:iRefIndex]] | ||
+ | <!-- | ||
− | |||
− | |||
|<html> | |<html> | ||
Line 74: | Line 106: | ||
</html> | </html> | ||
− | |||
| style="vertical-align: top" | | | style="vertical-align: top" | | ||
+ | |||
+ | |||
=== [[ Donations | Donations welcome ]] === | === [[ Donations | Donations welcome ]] === | ||
Line 81: | Line 114: | ||
− | + | --> | |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | -- | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− |
Latest revision as of 19:59, 28 August 2023
iRefIndex provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB, MPPI, Reactome, VirHostnet, and QuickGO.
DownloadDownload version 20.0 of the iRefIndex in PSI-MITAB tab-delimited format.
| |
More about iRefIndexMore ways to access iRefIndex, documentation, release notes, citations and references, technical details, mailing list, contact and license.
| |
More about Donaldson ResearchSupport for updates to and use of iRefIndex can be provided by Donaldson Research.
| |
More about the VIB Bioinformatics CoreThe iRefIndex site is now hosted at the VIB Bioinformatics Core including PSICQUIC webservices that can be accessed here using either SOAP or REST. |
Contact
If you have comments, questions or would like to be added to a list receiving news of updates, please write to us at:
VIB Bioinformatics core [1] or Ian Donaldson email me