Difference between revisions of "Bioscape Web Resources"
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The Bioscape Web resources provide the principal end-user interface to Bioscape as described in the [[Using the Bioscape Web Application|"Using the Bioscape Web Application"]] document. Typically, a user will follow a specific workflow supported by a number of resources described in the application's "site map", found in the <tt>bsweb</tt> package (specifically in the <tt>__init__.py</tt> source file) in the <tt>bsweb</tt> distribution. The following table summarises the source code organisation: | The Bioscape Web resources provide the principal end-user interface to Bioscape as described in the [[Using the Bioscape Web Application|"Using the Bioscape Web Application"]] document. Typically, a user will follow a specific workflow supported by a number of resources described in the application's "site map", found in the <tt>bsweb</tt> package (specifically in the <tt>__init__.py</tt> source file) in the <tt>bsweb</tt> distribution. The following table summarises the source code organisation: | ||
| − | {| cellspacing="0" cellpadding="5" style=" | + | {| border="1" cellspacing="0" cellpadding="5" style="margin: 2em" |
! Pages | ! Pages | ||
! Logic package/module | ! Logic package/module | ||
Revision as of 17:33, 20 October 2009
The Bioscape Web resources provide the principal end-user interface to Bioscape as described in the "Using the Bioscape Web Application" document. Typically, a user will follow a specific workflow supported by a number of resources described in the application's "site map", found in the bsweb package (specifically in the __init__.py source file) in the bsweb distribution. The following table summarises the source code organisation:
| Pages | Logic package/module | Database access package/module |
|---|---|---|
| home (search), index (advanced search) | bsweb.pages | bsweb.pages.collections |
| gene disambiguation, gene summary | bsweb.genes | bsweb.genes.collections |
| gene and evidence mention summaries | bsweb.documents | bsweb.documents.viewers |
| document lists | bsweb.documents | bsweb.documents.collections |
| annotated documents | bsweb.documents | bsweb.documents.viewers |
| mention scoring summaries | bsweb.documents | bsweb.documents.collections |
To summarise, page functionality typically resides in the top-level of a package, database queries providing lists of results reside in collections modules, and the special database/text index combination supporting annotated documents resides in the viewers module in the bsweb.documents package.
