Statistics iRefIndex 17.0
Interactions available from major taxonomies (corrected)
Taxons of the protein interactors have been corrected to correspond to the taxon provided in the protein sequence record regardless of the taxon listed in the interaction record. See PMID 18823568 for details.
| NCBI taxonomy identifier | Scientific name | Number of interactions |
| 9606 | Homo sapiens | 732100 |
| 559292 | Saccharomyces cerevisiae S288C | 139956 |
| 7227 | Drosophila melanogaster | 76585 |
| 10090 | Mus musculus | 70996 |
| 3702 | Arabidopsis thaliana | 59726 |
| 6239 | Caenorhabditis elegans | 32382 |
| 83333 | Escherichia coli K-12 | 16968 |
| 10116 | Rattus norvegicus | 14516 |
| 316407 | Escherichia coli str. K-12 substr. W3110 | 12822 |
| 4896 | Schizosaccharomyces pombe | 12432 |
| 192222 | Campylobacter jejuni subsp. jejuni NCTC 11168 =ATCC 700819 | 11930 |
| 632 | Yersinia pestis | 4166 |
| 243276 | Treponema pallidum subsp. pallidum str. Nichols | 3643 |
| 1111708 | Synechocystis sp. PCC 6803 substr. Kazusa | 3275 |
Summary of mapping interaction records to RIGs (redundant interaction groups)
Source: Interaction data source. Total records: Total number of interaction records found in source. Protein-only interactors:Total number of interactions involving only protein interactors. PPI assigned to RIGID: Number of interactions where all protein interactors were assigned to a ROG. Percentage of column 3 is shown. Unique RIGIDs (interactions): Number of unique protein interactions and complexes (RIGID's) found in the data source (also expressed as a percentage of column 4). For a description of the term RIGs, see README_MITAB2.6_for_iRefIndex#Understanding_the_iRefIndex_MITAB_format and the original paper PMID 18823568.
| Source | Total records | Protein-related interactions | PPI assigned to RIGID | % | Unique RIGIDs | % |
| BAR | 10396 | 10396 | 10383 | 99.87 | 10369 | 99.87 |
| BHF_UCL | 2341 | 2327 | 2327 | 100.00 | 1514 | 65.06 |
| BIND | 157736 | 91309 | 68064 | 74.54 | 49513 | 72.74 |
| BIND_TRANSLATION | 192923 | 84138 | 82233 | 97.74 | 60855 | 74.00 |
| BIOGRID | 1760395 | 873924 | 869987 | 99.55 | 646657 | 74.33 |
| CORUM | 4274 | 4274 | 4270 | 99.91 | 4018 | 94.10 |
| DIP | 81731 | 80134 | 79878 | 99.68 | 77468 | 96.98 |
| HPIDB | 6038 | 5769 | 5769 | 100.00 | 2432 | 42.16 |
| HPRD | 83022 | 83022 | 82983 | 99.95 | 40530 | 48.84 |
| HURI | 171545 | 168756 | 168750 | 100.00 | 51482 | 30.51 |
| INNATEDB | 18408 | 18408 | 6903 | 37.50 | 4815 | 69.75 |
| INTACT | 651130 | 597534 | 597404 | 99.98 | 345369 | 57.81 |
| INTCOMPLEX | 2821 | 2261 | 2261 | 100.00 | 2226 | 98.45 |
| MATRIXDB | 37217 | 36866 | 36866 | 100.00 | 22361 | 60.65 |
| MBINFO | 1084 | 1057 | 1057 | 100.00 | 539 | 50.99 |
| MINT | 165946 | 165136 | 165118 | 99.99 | 61283 | 37.11 |
| MPACT | 16504 | 16504 | 16373 | 99.21 | 13398 | 81.83 |
| MPIDB | 1505 | 1504 | 1425 | 94.75 | 893 | 62.67 |
| MPPI | 1814 | 1758 | 1578 | 89.76 | 776 | 49.18 |
| QUICKGO | 75574 | 60741 | 58630 | 96.52 | 29763 | 50.76 |
| REACTOME | 141996 | 141996 | 141844 | 99.89 | 126328 | 89.06 |
| SPIKE | 29686 | 29686 | 28327 | 95.42 | 27828 | 98.24 |
| UNIPROTPP | 12863 | 12775 | 12775 | 100.00 | 7233 | 56.62 |
| VIRUSHOST | 15000 | 15000 | 15000 | 100.00 | 9397 | 62.65 |
| (All) | 3641949 | 2505275 | 2460205 | 98.20 | 1185907 | 48.20 |
