README Cytoscape plugin menu 1.0x
Content of this page will be transferred to :README_Cytoscape_plugin_1.0x
- 1 iRefScape
- 1.1 Search tools
- 1.2 View tools
- 1.2.1 Toggle selected multi-edges
- 1.2.2 Zoom to selected
- 1.2.3 Select last iRefScape selection
- 1.2.4 Select nodes with different taxid than query node
- 1.2.5 Select between nodes
- 1.2.6 Select between nodes with originals
- 1.2.7 Show spoke-represented complexes
- 1.2.8 (Currently hidden, used for debuging) Show live details of nodes and edges
- 1.3 Grouping
- 1.4 Hide/Un-hide
- 2 Grouping and adjacency matrix
A new menu called "iRefScape" will be created when the plugin is activated.
This sub menu contain search related operations.
Retrieve interactions for the selected nodes
This option will load interactions involving the selected nodes. Nodes could be selected using the mouse or using an operation such as applying a filter.
Expand one level
This will load interactions involving all the nodes in the current network.