http://irefindex.vib.be/wiki/index.php?title=Sources_iRefIndex_14.0&feed=atom&action=history
Sources iRefIndex 14.0 - Revision history
2024-03-29T00:31:17Z
Revision history for this page on the wiki
MediaWiki 1.33.0
http://irefindex.vib.be/wiki/index.php?title=Sources_iRefIndex_14.0&diff=4251&oldid=prev
Ian.donaldson at 10:47, 21 April 2015
2015-04-21T10:47:12Z
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 10:47, 21 April 2015</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><pre></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><pre></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">'''</del>Interaction data sets<del class="diffchange diffchange-inline">'''</del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Interaction data sets</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>BIND DATE 2005-05-25</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>BIND DATE 2005-05-25</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">'''</del>Supporting data sets<del class="diffchange diffchange-inline">'''</del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Supporting data sets</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>PSI_MI DATE 2015-03-13 10:08:11</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>PSI_MI DATE 2015-03-13 10:08:11</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div></pre></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div></pre></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;"></del></div></td><td colspan="2"> </td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;"></del></div></td><td colspan="2"> </td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== All iRefIndex Pages ==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== All iRefIndex Pages ==</div></td></tr>
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Ian.donaldson
http://irefindex.vib.be/wiki/index.php?title=Sources_iRefIndex_14.0&diff=4250&oldid=prev
Ian.donaldson at 10:45, 21 April 2015
2015-04-21T10:45:15Z
<p></p>
<a href="http://irefindex.vib.be/wiki/index.php?title=Sources_iRefIndex_14.0&diff=4250&oldid=4249">Show changes</a>
Ian.donaldson
http://irefindex.vib.be/wiki/index.php?title=Sources_iRefIndex_14.0&diff=4249&oldid=prev
Ian.donaldson: Created page with "Last edited: {{REVISIONYEAR}}-{{padleft:{{REVISIONMONTH}}|2}}-{{REVISIONDAY2}} Applies to iRefIndex release: 13.0 Release date: 09-12-2013 Authors: Ian Donaldson Database:..."
2015-04-21T10:26:21Z
<p>Created page with "Last edited: {{REVISIONYEAR}}-{{padleft:{{REVISIONMONTH}}|2}}-{{REVISIONDAY2}} Applies to iRefIndex release: 13.0 Release date: 09-12-2013 Authors: Ian Donaldson Database:..."</p>
<p><b>New page</b></p><div>Last edited: {{REVISIONYEAR}}-{{padleft:{{REVISIONMONTH}}|2}}-{{REVISIONDAY2}}<br />
<br />
Applies to iRefIndex release: 13.0<br />
<br />
Release date: 09-12-2013<br />
<br />
Authors: Ian Donaldson<br />
<br />
Database: iRefIndex (http://irefindex.org)<br />
<br />
<br />
Description: This file lists interaction and protein sequence related resources used for the current build of the iRefIndex.<br />
Statistics for the iRefIndex are available and include a breakdown of interactors and interactions from each data source.<br />
*For statistics on the full dataset please refer to: http://irefindex.org/wiki/index.php?title=Statistics_iRefIndex_13.0<br />
<br />
<br />
<pre><br />
BIND DATE 2005-05-25<br />
BIND RELEASE_URL http://bond.unleashedinformatics.com/downloads/data/BIND/data/bindflatfiles/bindindex/<br />
BIND DOWNLOAD_FILES 20060525*.txt<br />
<br />
BIND_TRANSLATION DATE 2010-12-15 15:54:01<br />
BIND_TRANSLATION RELEASE_URL http://download.baderlab.org/BINDTranslation/release1_0/<br />
BIND_TRANSLATION DOWNLOAD_FILES BINDTranslation_v1_xml_AllSpecies.tar.gz<br />
<br />
BIOGRID DATE 2013-11-01 03:16:29<br />
BIOGRID RELEASE_URL http://thebiogrid.org/downloads/archives/Release%20Archive/BIOGRID-3.2.106/<br />
BIOGRID DOWNLOAD_FILES BIOGRID-ALL-3.2.106.psi25.zip<br />
<br />
CORUM DATE 2009-12-02 18:24:15<br />
CORUM RELEASE_URL http://mips.gsf.de/genre/export/sites/default/corum/<br />
CORUM DOWNLOAD_FILES allComplexes.psimi.zip<br />
<br />
DIP DOWNLOAD ftp://dip.doe-mbi.ucla.edu/2013/mif25/dip20131031.mif25.gz<br />
DIP FILENAME dip20131031.mif25<br />
DIP DATE 10/31/2013<br />
DIP RELEASE_URL http://dip.doe-mbi.ucla.edu/dip/<br />
<br />
HPRD RELEASE_URL http://hprd.org<br />
HPRD DOWNLOAD_FILES HPRD_PSIMI_041310.tar.gz<br />
<br />
INTACT DATE 2013-11-21 00:19:00<br />
INTACT RELEASE_URL ftp://ftp.ebi.ac.uk/pub/databases/intact/current/psi25/<br />
INTACT DOWNLOAD_FILES pmidMIF25.zip<br />
<br />
MATRIXDB DATE 2012-08-03 11:26:01<br />
MATRIXDB RELEASE_URL http://matrixdb.ibcp.fr/cgi-bin/download%3C../../<br />
MATRIXDB DOWNLOAD_FILES MatrixDB_20120801.xml.zip<br />
<br />
MPACT DATE 2008-09-30 22:00:00<br />
MPACT RELEASE_URL local copy<br />
MPACT DOWNLOAD_FILES mpact-complete.psi25.xml.gz<br />
<br />
MPPI DATE 2004-06-01 15:37:37<br />
MPPI RELEASE_URL local copy<br />
MPPI DOWNLOAD_FILES mppi.gz<br />
<br />
OPHID DATE 2006-07-07<br />
OPHID RELEASE_URL local copy<br />
OPHID DOWNLOAD_FILES ophid*.xml<br />
<br />
MPIDB DATE 2011-10-03<br />
MPIDB RELEASE_URL http://www.jcvi.org/mpidb/download.php?dbsource=<br />
MPIDB DOWNLOAD_FILES MPI-IMEX MPI-LIT<br />
<br />
INNATEDB DATE 2013-11-25 09:00:45<br />
INNATEDB RELEASE_URL http://www.innatedb.com/download/interactions/<br />
INNATEDB DOWNLOAD_FILES innatedb_all.mitab.gz<br />
<br />
PSI_MI DATE 2013-11-28 11:24:01<br />
PSI_MI RELEASE_URL http://psidev.cvs.sourceforge.net/viewvc/psidev/psi/mi/rel25/data/<br />
PSI_MI DOWNLOAD_FILES psi-mi25.obo<br />
<br />
TAXONOMY DATE 2013-11-28 10:20:00<br />
TAXONOMY RELEASE_URL ftp://ftp.ncbi.nih.gov/pub/taxonomy/<br />
TAXONOMY DOWNLOAD_FILES taxdump.tar.gz<br />
<br />
DIG DATE 2010-06-14<br />
DIG RELEASE_URL file:///storage/localdata/DIG/<br />
DIG DOWNLOAD_FILES morbidmap14062010.txt<br />
<br />
FLY VERSION 2013_11<br />
FLY DATE 13-Nov-2013<br />
FLY RELEASE_URL http://www.uniprot.org/docs/<br />
FLY DOWNLOAD_FILES fly.txt<br />
<br />
GENE DATE 2013-11-28 01:28:00<br />
GENE RELEASE_URL ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/<br />
GENE DOWNLOAD_FILES gene2refseq.gz gene_info.gz gene2go.gz gene_history.gz<br />
<br />
IPI DATE 2013-11-28 11:27:31<br />
IPI RELEASE_URL file:///storage/localdata/IPI/<br />
IPI DOWNLOAD_FILES *.fasta.gz<br />
<br />
MMDB DATE 2013-11-28 08:38:00<br />
MMDB RELEASE_URL ftp://ftp.ncbi.nih.gov/mmdb/pdbeast/<br />
MMDB DOWNLOAD_FILES table<br />
<br />
PDB DATE 2013-11-27 21:24:00<br />
PDB RELEASE_URL ftp://ftp.ncbi.nih.gov/blast/db/FASTA/<br />
PDB DOWNLOAD_FILES pdbaa.gz<br />
<br />
REFSEQ DATE 2013-11-12 19:53:00<br />
REFSEQ RELEASE_URL ftp://ftp.ncbi.nih.gov/refseq/release//complete/<br />
REFSEQ DOWNLOAD_FILES complete*.protein.gpff.gz<br />
<br />
UNIPROT VERSION 2013_11<br />
UNIPROT DATE 13-Nov-2013<br />
UNIPROT RELEASE_URL ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/complete/<br />
UNIPROT DOWNLOAD_FILES uniprot_sprot.dat.gz uniprot_trembl.dat.gz uniprot_sprot_varsplic.fasta.gz reldate.txt<br />
<br />
YEAST VERSION 2013_11<br />
YEAST DATE 13-Nov-2013<br />
YEAST RELEASE_URL http://www.uniprot.org/docs/<br />
YEAST DOWNLOAD_FILES yeast.txt<br />
</pre><br />
<br />
<br />
<br />
== All iRefIndex Pages ==<br />
<br />
Follow this link for a listing of all iRefIndex related pages (archived and current).<br />
[[Category:iRefIndex]]</div>
Ian.donaldson