User contributions
From irefindex
- 12:00, 14 September 2010 diff hist +47 iRefIndex Build Process →BIND Translation: Updated the download information.
- 09:32, 6 September 2010 diff hist -71 m Bioinformatics course Removed weird "skype highlighting" text.
- 13:46, 23 August 2010 diff hist -11 iRefIndex →Contact: Fixed link to new Biotek site.
- 14:31, 5 August 2010 diff hist +3 m README MITAB2.6 for iRefIndex 7.0 →Understanding the iRefIndex MITAB format: Minor fixes and formatting changes.
- 16:58, 15 July 2010 diff hist -356 Bioseminar Updated the page to give details of the new arrangements.
- 16:48, 15 July 2010 diff hist +5,192 Bioscape Result Assessment Added notes about disambiguation using unambiguous/reliable gene mentions. current
- 13:49, 14 July 2010 diff hist -92 m Bioscape Issues and Tasks Moved note to a separate page. current
- 13:48, 14 July 2010 diff hist -92 m Bioscape Development Moved note to a separate page. current
- 13:48, 14 July 2010 diff hist +22 m Displaying Bioscape Search Results Added status note. current
- 13:47, 14 July 2010 diff hist +22 m Bioscape Web Resources Added status note. current
- 13:47, 14 July 2010 diff hist +22 m Bioscape Result Assessment Added status note.
- 13:46, 14 July 2010 diff hist +22 m Bioscape Searching Techniques Added status note. current
- 13:46, 14 July 2010 diff hist +22 m Bioscape Searching Added status note. current
- 13:45, 14 July 2010 diff hist +22 m Bioscape Tokenisation Added status note. current
- 13:45, 14 July 2010 diff hist +71 Bioscape Indexing Added status note. Clarified the status of the indexing solutions used in Bioscape. current
- 13:44, 14 July 2010 diff hist +22 m Bioscape Scoring Techniques Added status note. current
- 13:43, 14 July 2010 diff hist -92 m Bioscape Methods Moved note to a separate page. current
- 13:42, 14 July 2010 diff hist +22 m Bioscape Data Types Added status note. current
- 13:41, 14 July 2010 diff hist +141 Supported Data Sources Added status note, changed note appearances, added GeneRIF. current
- 13:39, 14 July 2010 diff hist +22 m Bioscape Data Sources Added status note. current
- 13:39, 14 July 2010 diff hist -92 m Bioscape Distribution Moved note to a separate page. current
- 13:38, 14 July 2010 diff hist +22 m Bioscape Workflow Added status note. current
- 13:38, 14 July 2010 diff hist +22 m Bioscape Configuration Added status note. current
- 13:37, 14 July 2010 diff hist -145 Bioscape Dependencies Moved note to a separate page. Removed Lucene from the dependencies. current
- 13:36, 14 July 2010 diff hist -92 m Bioscape Installation Moved note to a separate page. current
- 13:36, 14 July 2010 diff hist -92 m Bioscape Manual Moved note to a separate page. current
- 13:35, 14 July 2010 diff hist +103 N Bioscape Status Added a common note for inclusion in other pages. current
- 15:34, 9 July 2010 diff hist +6,161 N iRefIndex MITAB2.6 Parser Attempted to make a page corresponding to the revised MITAB format.
- 16:17, 8 July 2010 diff hist +485 README iRefIndex MITAB2.6 proposal for 7.0 →Understanding the iRefIndex MITAB format: Added some notes about finding different group sizes.
- 15:27, 8 July 2010 diff hist +2,195 README iRefIndex MITAB2.6 proposal for 7.0 →Understanding the iRefIndex MITAB format: Introduced sections. Added a description of the canonical interaction information.
- 18:12, 7 July 2010 diff hist -151 README iRefIndex MITAB2.6 proposal for 7.0 →Description: Updated version references.
- 18:10, 7 July 2010 diff hist +207 README iRefIndex MITAB2.6 proposal for 7.0 →Understanding the iRefIndex MITAB format: Updated the table.
- 17:44, 7 July 2010 diff hist -2,717 README iRefIndex MITAB2.6 proposal for 7.0 Removed columns 41 and 42. Renumbered the columns and references to columns.
- 17:03, 7 July 2010 diff hist -1,168 README iRefIndex MITAB2.6 proposal for 7.0 Removed columns 47 (replacing 35), 53.
- 16:58, 7 July 2010 diff hist +231 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 52 (numParticipants): Added a description of how this value can be different from the number of distinct interactors.
- 16:56, 7 July 2010 diff hist -54 m README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 51 (edgetype): Removed notes.
- 16:54, 7 July 2010 diff hist -35 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 44 (entrezGeneIds_B): Replaced with irogB.
- 16:54, 7 July 2010 diff hist -115 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 43 (entrezGeneIds_A): Replaced with irogA.
- 16:48, 7 July 2010 diff hist +14 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 39 (Final_ROGID_A): Column change.
- 16:47, 7 July 2010 diff hist +4 m README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 36 (Negative): Added horizontal rule.
- 16:46, 7 July 2010 diff hist -278 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 34 (Checksum_B): Replaced with content from After_C13N_ROGID_B in column 42.
- 16:44, 7 July 2010 diff hist +2,196 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 33 (Checksum_A): Replaced the content with the After_ROGID_A content previously in column 41.
- 16:30, 7 July 2010 diff hist -1 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 1 (uidA): Fixed column type.
- 16:30, 7 July 2010 diff hist -29 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 2 (uidB): Changed the example to reflect the updated nature of the field.
- 16:29, 7 July 2010 diff hist -795 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 1 (uidA): Changed the nature of the identifier, as discussed.
- 16:27, 7 July 2010 diff hist -3 README iRefIndex MITAB2.6 proposal for 7.0 →Understanding the iRefIndex MITAB format: Fixes in wording, formatting.
- 14:57, 6 July 2010 diff hist -10 README iRefIndex MITAB2.6 proposal for 7.0 →Understanding the iRefIndex MITAB format: Fixed Final_ROGID names.
- 14:57, 6 July 2010 diff hist -5 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 40 (Final_C13N_ROGID_B): Fixed name, referenced column number.
- 14:56, 6 July 2010 diff hist -5 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 39 (Final_C13N_ROGID_A): Fixed name.
- 11:34, 5 July 2010 diff hist +33 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 11 (taxb): Fixed column type and description.
- 11:33, 5 July 2010 diff hist +33 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 10 (taxa): Fixed the column type and description.
- 11:18, 5 July 2010 diff hist -91 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 16 (expansion): Fixed internal link.
- 10:52, 5 July 2010 diff hist +90 README iRefIndex MITAB2.6 proposal for 7.0 →Understanding the iRefIndex MITAB format: Updated the columns in the table.
- 10:13, 5 July 2010 diff hist +15 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 41 (After_C13N_ROGID_A): Tidying, name and column updates.
- 10:03, 5 July 2010 diff hist -4 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 48 (C13N_rig): Tidied up naming.
- 10:01, 5 July 2010 diff hist 0 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 52 (numParticipants): Fixed edgetype column number.
- 10:00, 5 July 2010 diff hist +100 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 53 (interaction_name): Tidied up. Expanded the "to do" note.
- 08:35, 5 July 2010 diff hist -68 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 51 (edgetype): Fixed link to refer within the same document.
- 16:46, 2 July 2010 diff hist +226 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 37 (OriginalReferenceA): Added a note about the relationship between this column and the old altA column.
- 15:59, 2 July 2010 diff hist -129 m README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 46 (MappingScoreB): Removed Sabry's marker.
- 15:58, 2 July 2010 diff hist +34 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 45 (MappingScoreA): Merged Sabry's comment and tidied.
- 15:50, 2 July 2010 diff hist +202 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 43 (entrezGeneIds_A): Added a more complete change note.
- 14:53, 2 July 2010 diff hist +183 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 5 (aliasA): Minor formatting, wording changes.
- 14:36, 2 July 2010 diff hist -2 m README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 32 (Update_date): Removed empty lines.
- 14:35, 2 July 2010 diff hist -13 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 29 (Host_organism_taxid): Various wording, formatting changes.
- 14:32, 2 July 2010 diff hist +45 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 26 (Annotations_A): Minor formatting changes.
- 14:05, 2 July 2010 diff hist +35 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 16 (expansion): Minor formatting changes.
- 14:02, 2 July 2010 diff hist +7 m README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 23 (xrefs_A): Minor formatting change.
- 13:57, 2 July 2010 diff hist -54 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 19 (experimental_role_A): Merged Sabry's comment.
- 13:56, 2 July 2010 diff hist +1 m README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 18 (biological_role_B): Minor formatting change.
- 13:56, 2 July 2010 diff hist -43 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 17 (biological_role_A): Minor formatting changes. Merged Sabry's comment.
- 13:53, 2 July 2010 diff hist +1 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 13 (sourcedb): Minor naming change.
- 13:52, 2 July 2010 diff hist +2 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 14 (interactionIdentifier): Minor formatting, wording changes.
- 13:49, 2 July 2010 diff hist +133 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 14 (interactionIdentifier): Minor formatting, wording changes.
- 13:46, 2 July 2010 diff hist +25 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 9 (pmids): Minor formatting, capitalisation changes.
- 13:20, 2 July 2010 diff hist +60 README iRefIndex MITAB2.6 proposal for 7.0 →Column number: 10 (taxa): Formatting changes.
- 12:59, 2 July 2010 diff hist -2,536 README iRefIndex MITAB2.6 proposal for 7.0 Removed column name table entries which were redundant duplicates of the headings. Added a change note about the altA column. Fixed some column types.
- 18:52, 1 July 2010 diff hist -121 README iRefIndex MITAB2.6 proposal for 7.0 Added a canonical interactor row to the explanatory table, moving various columns into it. Propagated column names for #39 and #40. Formatting changes. Updated various column headings.
- 16:59, 1 July 2010 diff hist +54,037 N README iRefIndex MITAB2.6 proposal for 7.0 Formatted the note at the top, added the table from 7.0 explaining the columns, added a last updated "macro". Introduced change note formatting. Formatted various examples.
- 16:33, 1 July 2010 diff hist +260 Template:Note →Usage: Added note about method 1. current
- 16:28, 1 July 2010 diff hist -4 Template:Note →Method 1: Attempt to make the template actually work.
- 16:26, 1 July 2010 diff hist +2 Template:Note →Method 1: Attempt to make the template actually work.
- 16:17, 1 July 2010 diff hist +726 Template:Note Added support for a different label, hopefully.
- 16:06, 1 July 2010 diff hist +17 Template:Note Changed text appearance.
- 16:05, 1 July 2010 diff hist +17 Template:Warning Changed text appearance. current
- 15:41, 1 July 2010 diff hist +21 Template:Warning Edited to match the note template.
- 15:39, 1 July 2010 diff hist +57 Template:Note Added padding and border.
- 15:37, 1 July 2010 diff hist -42 Template:Note Changed the label depending on whether a parameter is supplied.
- 15:16, 1 July 2010 diff hist +3 Template:Warning Changed icon alignment.
- 15:09, 1 July 2010 diff hist +3 Template:Note Changed icon alignment.
- 13:32, 1 July 2010 diff hist 0 Template:Note Fixed usage.
- 13:16, 1 July 2010 diff hist +172 Template:Note Fixed template rule, adopting the warning template's rule.
- 13:13, 1 July 2010 diff hist +33 N File:Attention niels epting.svg Warning icon from MediaWiki 1.16. current
- 13:12, 1 July 2010 diff hist +33 N File:Attention niels epting-18px.svg.png Warning icon from MediaWiki 1.16. current
- 13:07, 1 July 2010 diff hist 0 Template:Warning Fixed usage.
- 12:52, 1 July 2010 diff hist 0 Template:Note →Usage: Fixed template usage.
- 09:59, 1 July 2010 diff hist -82 Bioinformatics course Switched to percentages. Removed weird "skype highlighting" text. Tidied whitespace. Fixed year.
- 14:46, 30 June 2010 diff hist +113 iRefIndex MITAB2.5 Parser Added a link to the format description.
- 11:59, 30 June 2010 diff hist +77 Donaldson Group Tidied the content. Updated the Bioseminar details.
- 13:39, 15 June 2010 diff hist +900 Bioscape Searching Techniques Added example involving collections/sequences.