Search results
From irefindex
Create the page "Search" on this wiki! See also the search results found.
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- ...re not con-sidered). Due to the way the algorithm works when the opposite search (NP_002871<==>NP_004976) was performed and it took 120 seconds and returned3 KB (481 words) - 16:14, 27 April 2010
- 1 KB (182 words) - 13:48, 14 July 2010
Page text matches
- Search for FANCD2 and "Fanconi Anemia": Search for FANCD2 and "Fanconi Anaemia":1 KB (153 words) - 16:21, 28 September 2010
- * [http://www.htdig.org/ ht://Dig] - ''a search engine solution for individual Web sites'' ...://www.postgresql.org/docs/8.4/static/textsearch.html PostgreSQL full text search] - ''incorporates the previously separate tsearch2 functionality into recen3 KB (486 words) - 13:45, 27 October 2009
- # Update text search results and related information such as [[Bioscape Methods|result scores]] # Search results and related data preparation: <tt>search</tt>, <tt>sentencescore</tt>, <tt>results</tt>, <tt>resultscore</tt>, <tt>e5 KB (716 words) - 13:38, 14 July 2010
- # How do I search all the interactions involving the protein NP:477306? #* Type <tt>NP_477306</tt> on the search text box.4 KB (591 words) - 13:17, 25 February 2009
- === Adding New Search Result Types === Defining new kinds of search results involves a number of modifications:5 KB (827 words) - 13:48, 14 July 2010
- When there are many search terms, it is convenient to construct a batch file containing a list of all * Simple searching (recommended for users just wanting to search for a list of things)7 KB (1,128 words) - 15:41, 6 July 2011
- #>search= - activate search from command line1 KB (160 words) - 09:14, 18 June 2010
- ...erencing the underlying data type; a ''search'' connects a globally unique search term to a bioterm.3 KB (418 words) - 13:42, 14 July 2010
- [[Image:Bioscape-search-dialogue-adhoc.png|thumb|500px|The Bioscape search dialogue]] ...uation page will be shown first, as described in [[#Search_Disambiguation|"Search Disambiguation"]].12 KB (1,887 words) - 18:26, 16 November 2009
- ==Search cases== Search type: UniProt_Ac10 KB (1,397 words) - 17:26, 25 June 2010
- ...h]]), index ([[Using the Bioscape Web Application#Advanced_Search|advanced search]])3 KB (403 words) - 13:47, 14 July 2010
- ...e-grained tokenisation policy on any text thought to contain mentions of a search term, then validating such possible mentions using the more precise tokens. ...is strategy is the effect of discarding tokens from search terms: should a search term be rendered ambiguous or even eliminated by token filtering, such term6 KB (954 words) - 13:45, 14 July 2010
- ==Search tools== This sub menu contain search related operations.2 KB (335 words) - 15:01, 28 June 2011
- ** [[Displaying Bioscape Search Results]]827 bytes (77 words) - 13:36, 14 July 2010
- ...n Source Text Mining Tools for Cancer Surveillance] [http://209.85.129.132/search?q=cache:IdtRfrugXh0J:www.cdc.gov/cancer/npcr/npcrpdfs/text_mining_tools.pdf === Text Search Resources ===9 KB (1,355 words) - 14:04, 17 February 2010
- http://wodaklab.org/iRefWeb/search/index?q=xxx:yyy You can also use this xxx:yyy format directly in the iRefWeb search interface for advanced searching or to test links to iRefWeb.3 KB (522 words) - 01:14, 5 August 2010
- # Search biomedical literature using the contents of the lexicon, subject to filteri # Assign bioentities to the text search results.13 KB (1,932 words) - 13:43, 14 July 2010
- ==Search cases== Search type: UniProt_Ac20 KB (3,064 words) - 12:43, 15 June 2010
- ==Search tools== ...'''selected nodes'''. This action is the same as performing a iteration=1 search using iRefScape for the selected nodes.9 KB (1,459 words) - 15:45, 6 July 2011
- === Search for interactions involving “QCR2_HUMAN”=== # Select "Search protein-protein interactions for a protein".19 KB (3,075 words) - 16:29, 6 July 2011
- ==Using the Wizard - an example search == # Select "Search protein-protein interactions for a protein".25 KB (4,001 words) - 16:28, 6 July 2011
- Bioscape combines a number of processes in order to produce search results from textual document and other data. This document attempts to des ...gin, the documents to be searched must be acquired and processed such that search operations performed on these documents may be done relatively efficiently.24 KB (3,501 words) - 13:46, 14 July 2010
- directed, 641 nodes , 1586 Edges, (search results for Raf1, type=geneSymbol, taxid=any from iRefsCape )2 KB (243 words) - 12:08, 11 April 2010
- ==Search cases== ! align="center" style="background:#f0f0f0;" | Search Type24 KB (3,634 words) - 17:32, 24 November 2011
- ...sequential reads from a compacted or optimised index when finding a given search term. ...sult sets for particular terms must also be efficient: unlike conventional search solutions which may present pages of results and not attempt to provide a g6 KB (874 words) - 13:45, 14 July 2010
- ==Search cases== Search type: UniProt_Ac28 KB (4,119 words) - 14:30, 18 June 2010
- ==Search cases== Search type: UniProt_Ac28 KB (4,119 words) - 00:10, 19 June 2010
- ...archon=names&suite=all§ion=all Debian] and [http://packages.ubuntu.com/search?keywords=openjdk-6-jdk&searchon=names&suite=all§ion=all Ubuntu]. === Search for interactions involving “QCR2_HUMAN” ===31 KB (4,911 words) - 16:28, 6 July 2011
- * search function and evidence supporting interactions found,2 KB (293 words) - 13:47, 15 February 2011
- ...ed by the EntrezGene database). In those cases where no hit was found, the search was broadened to include synonyms and locus names for the gene name listed ...es, stand-alone digits and roman numerals are also removed. The resulting search strings are anchored at the beginning to select for partial title hits. Tw10 KB (1,459 words) - 11:55, 17 October 2011
- ...re not con-sidered). Due to the way the algorithm works when the opposite search (NP_002871<==>NP_004976) was performed and it took 120 seconds and returned3 KB (481 words) - 16:14, 27 April 2010
- ..., HPRD, IntAct, MINT, MPact, MPPI and OPHID. This index allows the user to search for a protein and retrieve a non-redundant list of interactors for that pro2 KB (263 words) - 11:32, 28 December 2019
- == Using the Wizard - an example search == # Select "Search protein-protein interactions for a protein".33 KB (5,470 words) - 16:18, 6 July 2011
- == Using the Wizard - an example search == # Select "Search protein-protein interactions for a protein".36 KB (5,904 words) - 16:13, 6 July 2011
- Search for ambiguous and unambiguous names separately Do pre-search and score on names according to the number of results returned6 KB (843 words) - 13:49, 14 July 2010
- ...s) as determined by a multitude of methods. This index allows the user to search for a protein and retrieve a non-redundant list of interactors for that pro ...action records from multiple sources. The resulting iRefIndex may be used search for the existence of interaction data for any protein regardless of the ori9 KB (1,251 words) - 12:27, 17 October 2011
- == Using the Wizard - an example search == Follow the prompts. Here is an example search:45 KB (7,264 words) - 11:10, 19 March 2013
- | BioText||http://biosearch.berkeley.edu ||Full-text search engine for open source articles. [19] | STRING||http://string.embl.de||Search Tool for Retrieval of Interacting Genes/Proteins [23]15 KB (2,118 words) - 10:10, 23 August 2011
- The suggestions produced by Bioscape's search activities can be assessed subject to the availability of "gold standard" d ...Bioscape's searching process which merely attempts to speculatively match search terms from a lexicon against the text of each document of interest. Thus, a10 KB (1,540 words) - 16:48, 15 July 2010
- ...s) as determined by a multitude of methods. This index allows the user to search for a protein and retrieve a non-redundant list of interactors for that pro ...action records from multiple sources. The resulting iRefIndex may be used search for the existence of interaction data for any protein regardless of the ori11 KB (1,496 words) - 08:22, 23 April 2015
- ...s) as determined by a multitude of methods. This index allows the user to search for a protein and retrieve a non-redundant list of interactors for that pro ...action records from multiple sources. The resulting iRefIndex may be used search for the existence of interaction data for any protein regardless of the ori11 KB (1,556 words) - 12:52, 22 April 2015
- ..., HPRD, IntAct, MINT, MPact, MPPI and OPHID. This index allows the user to search for a protein and retrieve a non-redundant list of interactors for that pro5 KB (680 words) - 16:05, 15 November 2012
- ...ocal brokers that provide feedback on databases, interfaces and associated search tools. We will propose a team of 8 to 10 curators who will search primary biomedical research literature and submit biomolecular interaction22 KB (3,317 words) - 09:40, 29 January 2010
- ...o, you will see an Information frame with several tabs in it ("Messages", "Search history", "Query helper", and so on). This window can be closed. ...archon=names&suite=all§ion=all Debian] and [http://packages.ubuntu.com/search?keywords=openjdk-6-jdk&searchon=names&suite=all§ion=all Ubuntu].15 KB (2,297 words) - 16:09, 6 July 2011
- ...o, you will see an Information frame with several tabs in it ("Messages", "Search history", "Query helper", and so on). This window can be closed. ...archon=names&suite=all§ion=all Debian] and [http://packages.ubuntu.com/search?keywords=openjdk-6-jdk&searchon=names&suite=all§ion=all Ubuntu].18 KB (2,800 words) - 20:08, 14 March 2013
- ...s) as determined by a multitude of methods. This index allows the user to search for a protein and retrieve a non-redundant list of interactors for that pro ...action records from multiple sources. The resulting iRefIndex may be used search for the existence of interaction data for any protein regardless of the ori14 KB (2,049 words) - 12:30, 17 October 2011
- ...archon=names&suite=all§ion=all Debian] and [http://packages.ubuntu.com/search?keywords=openjdk-6-jdk&searchon=names&suite=all§ion=all Ubuntu]. ...some index files and serialized Java objects files which will be used in search and load operations.14 KB (2,206 words) - 11:58, 12 April 2010
- ...ature of the searching is speculative, meaning that no predefined lists of search terms is used, but where certain characteristic patterns are sought after i12 KB (1,525 words) - 13:46, 14 July 2010
- #Go to http://search.cpan.org/ <pre>search bioperl</pre></li>12 KB (1,936 words) - 15:22, 22 November 2011
- ...orm) can be found in the corresponding iRefWeb record. See column xxx and search for this interaction record at http://wodaklab.org/iRefWeb/. ...3 - 38 as well as in the corresponding iRefWeb record. See column xxx and search for this interaction record at http://wodaklab.org/iRefWeb/.52 KB (7,816 words) - 13:44, 27 October 2010
