Difference between revisions of "iRefIndex"

From irefindex
(16 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
__NOTOC__
 
__NOTOC__
  
iRefIndex provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB and MPPI.  
+
iRefIndex provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB, MPPI, Reactome, VirHostnet, and QuickGO.  
  
 
{|class="wikitable" style="text-align:left; clear: left" border="0" cellpadding="10"
 
{|class="wikitable" style="text-align:left; clear: left" border="0" cellpadding="10"
Line 19: Line 19:
 
| style="vertical-align: top" |
 
| style="vertical-align: top" |
 
=== [[README_MITAB2.6_for_iRefIndex|Download]] ===
 
=== [[README_MITAB2.6_for_iRefIndex|Download]] ===
Download version 14.0 of the iRefIndex in PSI-MITAB tab-delimited format.
+
Download version 17.0 of the iRefIndex in PSI-MITAB tab-delimited format.
  
  
Line 34: Line 34:
 
<!-- iRefIndex more link and text -->
 
<!-- iRefIndex more link and text -->
 
| style="vertical-align: top" |
 
| style="vertical-align: top" |
 +
 
=== [[ iRefIndex more | More about iRefIndex ]] ===
 
=== [[ iRefIndex more | More about iRefIndex ]] ===
  
Line 57: Line 58:
  
  
 
+
<!--More about VIB row-->
<!--donate row-->
 
 
|-
 
|-
  
|<html>
+
<!-- VIB logo -->
<form action="https://www.paypal.com/cgi-bin/webscr" method="post" target="_top">
+
|<imagemap>
<input type="hidden" name="cmd" value="_s-xclick">
+
Image:donaldson_research_logo.png|80x80px
<input type="hidden" name="hosted_button_id" value="EE635XFGX4E8L">
+
default [[ Donaldson Research ]]
<input type="image" src="https://www.paypalobjects.com/en_US/NO/i/btn/btn_donateCC_LG.gif" border="0" name="submit" alt="PayPal - The safer, easier way to pay online!">
+
desc none
<img alt="" border="0" src="https://www.paypalobjects.com/en_US/i/scr/pixel.gif" width="1" height="1">
+
</imagemap>
</form>
 
</html>
 
  
<!-- donate row text -->
+
<!-- VIB more link and text -->
 
| style="vertical-align: top" |
 
| style="vertical-align: top" |
  
=== [[ Donations | Donations welcome ]] ===
+
=== [http://irefindex.vib.be  More about the VIB Bioinformatics Core] ===
  
About iRefIndex costs and donating.
+
The iRefIndex site is now hosted at the VIB Bioinformatics Core including [http://www.ebi.ac.uk/Tools/webservices/psicquic/registry/registry?action=STATUS PSICQUIC webservices]  that can be accessed [https://irefindex.vib.be/webservices  here] using either SOAP or REST.  
  
 +
|}
  
  
  
 +
----
  
|}
+
== Contact  ==
  
 +
If you have comments, questions or would like to be added to a list receiving news of updates, please write to us at:
  
 +
VIB Bioinformatics core [mailto:bits@vib.be] or Ian Donaldson [mailto:ian@donaldsonresearch.com email me]
  
 
----
 
----
  
== Contact  ==
+
[[Category:iRefIndex]]
 +
 
 +
 
 +
 
 +
<!--
 +
 
 +
 
 +
 
 +
|<html>
 +
<form action="https://www.paypal.com/cgi-bin/webscr" method="post" target="_top">
 +
<input type="hidden" name="cmd" value="_s-xclick">
 +
<input type="hidden" name="hosted_button_id" value="EE635XFGX4E8L">
 +
<input type="image" src="https://www.paypalobjects.com/en_US/NO/i/btn/btn_donateCC_LG.gif" border="0" name="submit" alt="PayPal - The safer, easier way to pay online!">
 +
<img alt="" border="0" src="https://www.paypalobjects.com/en_US/i/scr/pixel.gif" width="1" height="1">
 +
</form>
 +
</html>
 +
 
 +
| style="vertical-align: top" |
 +
 
  
Suggestions, requests, comments and questions are welcome.
+
=== [[ Donations | Donations welcome ]] ===
  
Ian Donaldson [mailto:ian@donaldsonresearch.com email me]
+
About iRefIndex costs and donating.
  
----
 
  
[[Category:iRefIndex]]
+
-->

Revision as of 10:43, 1 July 2020


iRefIndex provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB, MPPI, Reactome, VirHostnet, and QuickGO.

Document-save-80x80.png

Download

Download version 17.0 of the iRefIndex in PSI-MITAB tab-delimited format.


iRefIndex logo.png

More about iRefIndex

More ways to access iRefIndex, documentation, release notes, citations and references, technical details, mailing list, contact and license.


donaldson research logo.png

More about Donaldson Research

Support for updates to and use of iRefIndex can be provided by Donaldson Research.


donaldson research logo.png

More about the VIB Bioinformatics Core

The iRefIndex site is now hosted at the VIB Bioinformatics Core including PSICQUIC webservices that can be accessed here using either SOAP or REST.



Contact

If you have comments, questions or would like to be added to a list receiving news of updates, please write to us at:

VIB Bioinformatics core [1] or Ian Donaldson email me