iRefScape plugin menu

From irefindex
Revision as of 13:15, 28 June 2010 by Sabry (talk | contribs)

==Search tools== .

Retrieve interactions for the selected nodes

To load all protein-protein interactions and complexes involving one or more selected nodes. This action is same as performing a iteration=1 search using iRefScape for the selected nodes.

Expand one level

To load all protein-protein interactions and complexes involving at least one of the nodes in the current network. The behaviour is same as performing iteration=1 search using iRefScape for all the nodes.

Load interactions between neighbours

To complete the interactions between the currently loaded nodes. When a search & load operation is performed in iRefScape the network retuned contains all the proteins interacting with the query and the corresponding interactions. This does not return interactions between the neighbours of the query. This operation is same as performing a iteration=0 search using iRefScape for all the nodes. This action has no effect for networks for which this operation has already been performed using the option presented at the end of the search.


Clear load history (Reload everything next time)

Reset node degree

===Load user variablesv


View tools

Toggle selected multi-edges

Zoom to selected

Select last iRefScape selection

Select nodes with different taxid than query node

Select between nodes

Show spoke-represented complexes

Hide/Un-hide

Hide selected nodes

Hide nodes (except pseudonodes)

Hide nodes not selected

Hide nodes not selected (except pseudonodes)

Un-hide all

Safe mode