User contributions
From irefindex
- 08:47, 17 September 2009 diff hist +584 Statistics iRefIndex 6.0
- 09:32, 15 September 2009 diff hist +269 Bioinformatics course →Bioinformatics links relevant to the course
- 09:31, 15 September 2009 diff hist +12 N File:SAMPLE 1 nodeatribute.xls.zip MBV-INF 4410 current
- 09:28, 15 September 2009 diff hist +16 N File:SAMPLE 1 network.xls.zip For MBV-INF 4410 current
- 08:22, 15 September 2009 diff hist +5,806 Statistics iRefIndex 6.0
- 08:20, 15 September 2009 diff hist +9,171 N Statistics iRefIndex 6.0 New page: == Summary == *Total interactions : *Total distinct interactions (based on RIGID): ( % of total interactions) *Total distinct proteins (based on ROGID) : This page lists statistics ...
- 09:45, 14 September 2009 diff hist +521 iRefScape 0.5 →Extra features
- 09:30, 14 September 2009 diff hist +100 N File:Sample batch accessions.txt.zip A sample batch file to be used with a iRefIndex cytoscape plugin. Please uncompres file before using current
- 09:19, 14 September 2009 diff hist +78 iRefScape 0.5
- 09:10, 14 September 2009 diff hist -105 iRefScape 0.5 →Node Attributes
- 08:56, 14 September 2009 diff hist +858 Bioinformatics course →Bioinformatics links relevant to the course
- 11:33, 4 September 2009 diff hist +2 PSICQUIC Web Services for iRefIndex
- 11:33, 4 September 2009 diff hist +192 PSICQUIC Web Services for iRefIndex
- 11:31, 4 September 2009 diff hist -6 PSICQUIC Web Services for iRefIndex
- 09:14, 25 August 2009 diff hist +29,382 N README iRefIndex experiment MITAB 5.1 New page: Last edited: 25th, August 2009 Applies to iRefIndex release: 5.1 Release date: 21th, August 2009 Download location: Download available only via SFTP, please send request to ian.donald... current
- 16:49, 21 August 2009 diff hist +65 README iRefIndex MITAB 5.1 →Changes from last version current
- 16:32, 21 August 2009 diff hist +28,271 N README iRefIndex MITAB 5.1 New page: Last edited: 21th, August 2009 Applies to iRefIndex release: 5.1 Release date: 21th, August 2009 Download location: ftp://ftp.no.embnet.org/irefindex/data/archive/release_5.1/ Authors...
- 16:27, 21 August 2009 diff hist -36 README iRefIndex MITAB 5.0 →Description current
- 12:14, 19 August 2009 diff hist 0 iRefScape 0.6 →iRefIndex Cytoscape plugin
- 12:13, 19 August 2009 diff hist +70 N iRefScape 0.6 New page: == <span style="color:#0f0086"> iRefIndex Cytoscape plugin </span> ==
- 14:49, 17 August 2009 diff hist +38 README iRefIndex MITAB 5.0 →Description
- 14:38, 17 August 2009 diff hist +246 README iRefIndex MITAB 5.0
- 14:43, 16 August 2009 diff hist +3,212 N validator beta2 New page: {| {{table}} | align="center" style="background:#f0f0f0;"|'''Files:''' |- | ---------------------------------------------------------- |- | 1. iRefIndex_PSI_MI_TAB_Validator.jar |- | 2. sc... current
- 14:35, 16 August 2009 diff hist -1 Statistics iRefIndex free 5.0 current
- 17:10, 10 August 2009 diff hist +4 README iRefIndex Feedback 5.0 current
- 17:09, 10 August 2009 diff hist -158 iRefIndex →Statistics
- 17:08, 10 August 2009 diff hist 0 iRefIndex →Feedback files
- 17:08, 10 August 2009 diff hist 0 iRefIndex →Data availability via download
- 17:08, 10 August 2009 diff hist 0 iRefIndex →Data availability via download
- 17:07, 10 August 2009 diff hist +40 Statistics iRefIndex 5.0 →Summary current
- 17:05, 10 August 2009 diff hist +27,777 N README iRefIndex MITAB 5.0 New page: Last edited: 10th, August 2009 Applies to iRefIndex release: 5.0 Release date: 10th, August 2009 Download location: ftp://ftp.no.embnet.org/irefindex/data/archive/release_5.0/ Authors:...
- 15:39, 10 August 2009 diff hist -48 Statistics iRefIndex free 5.0 →Scores (Corresponds to Table 2 in PMID 18823568)
- 15:39, 10 August 2009 diff hist +39 Statistics iRefIndex 5.0 →Summary
- 15:38, 10 August 2009 diff hist -1 Statistics iRefIndex free 5.0
- 15:37, 10 August 2009 diff hist +208 Statistics iRefIndex free 5.0
- 15:30, 10 August 2009 diff hist +7,124 Statistics iRefIndex free 5.0
- 12:20, 4 August 2009 diff hist +20 README iRefIndex Feedback 5.0 →Descriptive analysis
- 09:03, 4 August 2009 diff hist +5 README iRefIndex Feedback 5.0 →Java libraries used in the process
- 09:03, 4 August 2009 diff hist +631 README iRefIndex Feedback 5.0 →Validation process
- 14:40, 3 August 2009 diff hist +90 README iRefIndex Feedback 5.0 →Column number: 14
- 14:30, 3 August 2009 diff hist +765 README iRefIndex Feedback 5.0 →Validation process
- 14:15, 3 August 2009 diff hist +28 README iRefIndex Feedback 5.0
- 14:07, 3 August 2009 diff hist +15,916 N README iRefIndex Feedback 5.0 New page: Last edited: , August 03th, 2009 Applies to iRefIndex release: 5.0 beta. Release date: August 05th, 2009 Authors: Ian Donaldson and Sabry Razick Database: iRefIndex (http://irefindex.u...
- 12:39, 1 August 2009 diff hist +5,862 N Statistics iRefIndex free 5.0 New page: {| {{table}} | align="center" style="background:#f0f0f0;"|'''Decimal_score''' | align="center" style="background:#f0f0f0;"|'''Binary_flag''' | align="center" style="background:#f0f0f0;"|''...
- 15:55, 31 July 2009 diff hist +107 Sources iRefIndex 5.0 →Interaction related resources current
- 15:49, 31 July 2009 diff hist +70 Sources iRefIndex 5.0 →Interaction related resources
- 19:44, 30 July 2009 diff hist +8 Statistics iRefIndex 5.0
- 19:44, 30 July 2009 diff hist +22 N File:Interactions by taxonomy beta5 complete.pdf Beta5 full by taxonomy current
- 19:43, 30 July 2009 diff hist -81 Statistics iRefIndex 5.0 →Top 15 uncorrected taxonomy groups in iRefIndex (Taxonomy identifiers as they appear in original source)
- 19:41, 30 July 2009 diff hist +162 Statistics iRefIndex 5.0 →Top 15 corrected taxonomy groups in iRefIndex (Taxonomy identifiers corrected using sequence database information)
- 19:40, 30 July 2009 diff hist +82 Statistics iRefIndex 5.0 →Top 15 uncorrected taxonomy groups in iRefIndex (Taxonomy identifiers as they appear in original source)
- 19:37, 30 July 2009 diff hist 0 File:Interactions by taxonomy beta5 full.pdf uploaded a new version of "Image:Interactions by taxonomy beta5 full.pdf": By taxonomy , full list current
- 19:34, 30 July 2009 diff hist 0 File:Interactions by taxonomy beta5 full.pdf uploaded a new version of "Image:Interactions by taxonomy beta5 full.pdf": Full list by taxonomy
- 19:30, 30 July 2009 diff hist -28 Statistics iRefIndex 5.0 →Summary
- 19:26, 30 July 2009 diff hist +927 Statistics iRefIndex 5.0 →Top 15 corrected taxonomy groups in iRefIndex (Taxonomy identifiers corrected using sequence database information)
- 19:25, 30 July 2009 diff hist +1,008 Statistics iRefIndex 5.0 →Top 15 uncorrected taxonomy groups in iRefIndex (Taxonomy identifiers as they appear in original source)
- 19:17, 30 July 2009 diff hist -38 Statistics iRefIndex 5.0 →Scores (Corresponds to Table 2 in PMID 18823568)
- 19:17, 30 July 2009 diff hist 0 Statistics iRefIndex 5.0 →Scores (Corresponds to Table 2 in PMID 18823568)
- 19:16, 30 July 2009 diff hist +3,902 Statistics iRefIndex 5.0 →Scores (Corresponds to Table 2 in PMID 18823568)
- 19:16, 30 July 2009 diff hist +6,162 Statistics iRefIndex 5.0 →ROG summary (Corresponds to Table 4 in PMID 18823568)
- 19:15, 30 July 2009 diff hist +1,077 Statistics iRefIndex 5.0 →Assignment of protein interactors to ROGs (Corresponds to Table 3 in PMID 18823568)
- 19:15, 30 July 2009 diff hist +988 Statistics iRefIndex 5.0 →Summary of mapping interaction records to RIGs (Corresponds to Table 5 in PMID 18823568)
- 19:14, 30 July 2009 diff hist +804 Statistics iRefIndex 5.0 →Interactors
- 19:14, 30 July 2009 diff hist +35 Statistics iRefIndex 5.0 →Interactions (Corresponds to Table 6 in PMID 18823568)
- 19:14, 30 July 2009 diff hist -937 Statistics iRefIndex 5.0 →Top 15 corrected taxonomy groups in iRefIndex (Taxonomy identifiers corrected using sequence database information)
- 19:14, 30 July 2009 diff hist -1,088 Statistics iRefIndex 5.0 →Top 15 uncorrected taxonomy groups in iRefIndex (Taxonomy identifiers as they appear in original source)
- 10:49, 27 July 2009 diff hist +769 Statistics iRefIndex 5.0 →Interactions (Corresponds to Table 6 in PMID 18823568)
- 10:31, 27 July 2009 diff hist -4 Statistics iRefIndex 5.0 →Top 15 uncorrected taxonomy groups in iRefIndex (Taxonomy identifiers as they appear in original source)
- 10:31, 27 July 2009 diff hist +32 Statistics iRefIndex 5.0 →Interactions available from major taxonomies
- 10:28, 27 July 2009 diff hist -52 Statistics iRefIndex 5.0 →Interactions available from major taxonomies
- 10:27, 27 July 2009 diff hist 0 File:Interactions by taxonomy beta5 full.pdf uploaded a new version of "Image:Interactions by taxonomy beta5 full.pdf": Grouped by NCBI taxon identifier
- 10:13, 27 July 2009 diff hist -12,866 Statistics iRefIndex 5.0
- 13:06, 23 July 2009 diff hist +3,746 Statistics iRefIndex 5.0 →Scores (Corresponds to Table 2 in PMID 18823568)
- 13:06, 23 July 2009 diff hist +5,662 Statistics iRefIndex 5.0 →ROG summary (Corresponds to Table 4 in PMID 18823568)
- 13:06, 23 July 2009 diff hist +1,076 Statistics iRefIndex 5.0 →Assignment of protein interactors to ROGs (Corresponds to Table 3 in PMID 18823568)
- 13:05, 23 July 2009 diff hist +987 Statistics iRefIndex 5.0 →Summary of mapping interaction records to RIGs (Corresponds to Table 5 in PMID 18823568)
- 13:05, 23 July 2009 diff hist +722 Statistics iRefIndex 5.0 →Interactors
- 13:04, 23 July 2009 diff hist +721 Statistics iRefIndex 5.0 →Interactions (Corresponds to Table 6 in PMID 18823568)
- 12:56, 23 July 2009 diff hist -52 Statistics iRefIndex 5.0 →Top 15 uncorrected taxonomy groups in iRefIndex (Taxonomy identifiers as they appear in original source)
- 12:51, 23 July 2009 diff hist +108 Statistics iRefIndex 5.0 →Top 15 uncorrected taxonomy groups in iRefIndex (Taxonomy identifiers as they appear in original source)
- 12:51, 23 July 2009 diff hist +14 Statistics iRefIndex 5.0 →Top 15 corrected taxonomy groups in iRefIndex (Taxonomy identifiers corrected using sequence database information)
- 12:51, 23 July 2009 diff hist +30 N File:Interactions by taxonomy beta5 full cor.pdf Grouped by taxonomy (corrcted) current
- 12:48, 23 July 2009 diff hist +19 N File:Interactions by taxonomy beta5 full.pdf Grouped by taxonomy
- 12:41, 23 July 2009 diff hist +2,262 Statistics iRefIndex 5.0 →Interactions available from major taxonomies
- 12:36, 23 July 2009 diff hist -13,497 Statistics iRefIndex 5.0
- 11:45, 20 July 2009 diff hist +15,064 N Statistics iRefIndex 5.0 New page: == Summary == *Total distinct interactions : 369,457 *Total distinct proteins : 83,388 This page lists statistics for our internal version of iRefIndex that includes all of the data fro...
- 15:11, 15 July 2009 diff hist +8 Sources iRefIndex 5.0 →Interaction related resources
- 13:29, 14 July 2009 diff hist +39 Sources iRefIndex 5.0 →Interaction related resources
- 17:05, 10 July 2009 diff hist -2 Sources iRefIndex 5.0 →Sequence related resources
- 10:48, 10 July 2009 diff hist +615 Sources iRefIndex 5.0 →Interaction related resources
- 09:19, 8 July 2009 diff hist -8 Sources iRefIndex 5.0 →Interaction related resources
- 08:47, 8 July 2009 diff hist +1,494 Sources iRefIndex 5.0
- 08:45, 8 July 2009 diff hist +682 Sources iRefIndex 5.0 →Sequence related resources
- 15:57, 6 July 2009 diff hist +612 N IsoformToBase mapping New page: = Mapping Isoforms to a Base form/canonical identifiers = The intention of this mapping was to verify whether the discrepancies among multiple sources when acquiring interactions from pub... current
- 08:01, 28 June 2009 diff hist +362 iRefScape 0.5 →Before you begin
- 13:03, 25 June 2009 diff hist -4 iRefIndex →Data availability via Cytoscape
- 09:03, 23 June 2009 diff hist -13 Sources iRefIndex 4.0 →Sequence related resources
- 13:33, 9 June 2009 diff hist 0 Sources iRefIndex 4.0 →Interaction related resources
- 13:31, 9 June 2009 diff hist 0 Statistics iRefIndex 4.0 current
- 13:30, 9 June 2009 diff hist 0 Statistics iRefIndex free 4.0 current